PROTEIN: HRGMv2_3872_71_9
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3872_71_9.pdb
Genome ID:
Protein ID:
HRGMv2_3872_71_9
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNNRFGLIVA SVAVVAVCSI CEGVAGNSEM NVFIDNLKEQ VPGKLTVGVE QMTSDCRRPH 60 RFYSVEAEND TTAQGIEYSV SSVKTGNVET ITLSLRNTRH TPFQPVKAGL RLGVDTYMDS 120 YPEWYGKFFP TLAVCEPDHF YGYMQSPGGK MKAVVSPDPI ASWSLDYNMG YPDYTQDNRW 180 FYGHRIECLN LDMLCQGPLP DHNPRLWKLE PGEQRIWTVK IIDINDADSF EETVYRHTGS 240 PVIKMERTSC APGDTLEITV WGTSPVMTIE DTRLVLQKVD TSLWRGVYHA TEPGIKNILL 300 TDGGRQAHGT LAVRHPWHST MRLARAAADR YRQKPTSHVE SWYGFHTAFD AARIMPEPGI 360 DSVLNRRFDL ILDKIFDRNT GSPYKYHWRI QNVSSTIGML ADRYLAYGNP ADLDLGERMA 420 GYLMGYQQAD GAYQNGHTDY TSVIYPAKSL LEFADAERIA GRKKQAARIE ASARRAIDHL 480 VTADGDLETE GQITYEDGMI SCSALQLGEM ALRSKDKKER RRYTEAMLKL LDGHDCLTQL 540 RVPDGRRRGG TLRFWEAQYD VFMLPNMISS PHGWSAWRAY ATYYAYLLTG REQWLRQTFD 600 AASAFAALID HESGDLSWAF VVDPYVRALQ VCEPDSNYTA DDDTYGNPHP ELYPNRNIIV 660 GEQYVPMIAD WQTIVSSDND VHECFKFIAE AVLCNAFIVE RPDGSFGTYN CTLVKDGKNL 720 LVTADEPQIK NLHVNLLKPH KVVFDGNLTH FQEIPHK 757
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A516PYA3-F1-model_v4 | PL27 | 50 | 750 | 1 | 640 | 0.7334 |
0.8037 |
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 50 | 726 | 9 | 629 | 0.7282 |
0.8139 |
| AF-E0S376-F1-model_v4 | PL27 | 57 | 730 | 20 | 593 | 0.7205 |
0.841 |
| A0A416I060 | PL27 | 45 | 727 | 1 | 651 | 0.717 |
0.7806 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 50 | 731 | 12 | 619 | 0.7159 |
0.8096 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 48 | 710 | 12 | 663 | 0.7153 |
0.7843 |
| A0A975CYI3 | PL27 | 48 | 692 | 9 | 598 | 0.7142 |
0.8165 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 21 | 710 | 15 | 643 | 0.708 |
0.7915 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 47 | 746 | 26 | 717 | 0.7065 |
0.7604 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 20 | 711 | 14 | 655 | 0.706 |
0.7812 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A516PYA3 | PL27 | 50 | 750 | 1 | 640 | 0.7334 |
0.8037 |
| A0A5P8M7F3 | PL27 | 50 | 726 | 9 | 629 | 0.7282 |
0.8139 |
| E0S376 | PL27 | 57 | 730 | 20 | 593 | 0.7205 |
0.841 |
| A0A416I060 | PL27 | 45 | 727 | 1 | 651 | 0.717 |
0.7806 |
| F5Y9B7 | PL27 | 50 | 731 | 12 | 619 | 0.7159 |
0.8096 |
| A0A2S0KVT5 | PL27 | 48 | 710 | 12 | 663 | 0.7153 |
0.7843 |
| A0A975CYI3 | PL27 | 48 | 692 | 9 | 598 | 0.7142 |
0.8165 |
| A0A6I5ZZU4 | PL27 | 47 | 746 | 26 | 717 | 0.7065 |
0.7604 |
| E3QS34 | PL27 | 25 | 753 | 1 | 702 | 0.7055 |
0.7423 |
| A0A174T7R5 | PL27 | 49 | 697 | 34 | 690 | 0.702 |
0.7877 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 47 | 695 | 9 | 669 | 0.706 |
0.7808 |
| 5nok-assembly1.cif.gz_A | 47 | 695 | 13 | 668 | 0.6992 |
0.7732 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.