PROTEIN: HRGMv2_3872_51_6
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Protein File & Metadata
Source:
HRGMv2_3872_51_6.pdb
Genome ID:
Protein ID:
HRGMv2_3872_51_6
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Protein Sequence
MHAAEHRFYA DEGMGDDFSP QDVVGTIQSV SDGDVETLNI TIKNNRHTPF QPVKAGIVLG 60 IDTYMDRYPE WNDRYFPTLL VCEPTHFYGY MQSPAGRIKA IASPDPVASW SLEYNLGYQD 120 PAPHWFMGHR IKSLRLDLLA APPLPSRHPQ DQWQLMPGEE RSWSIKIIDL SSLAQFEEVV 180 SHECDIPMLH LETTSTSPDC GMEFEVFGIN PSLTVDGVPS ALKKSGNKWK AEFTASESGI 240 YDIEVIDGDK KAHGHINVRY PWHRTIKLAR EAASKYKQKA TSHVESWYGF HTAFLAARYF 300 PCDSLDRLLN RRFDMVLDTL FDSGGNQKKY DWRIQNVSST IGMLADRYEA YGNKVDLMRA 360 RILADRFISS FQQEDGAYKT GGITYTSVIY PAKSILELAD AEWKAGFKAD ARRHELSAKR 420 AIDQLVESQG NFNTEGEITY EDGMVSCSAL QIGMFALRQN DKTLRRHYTD AMLEILRGHD 480 CLTQLRIPDG RRRGGTMRYW EAQYDVHILP NMISSPHGWS AWRAYATYYA FLLTGDERWI 540 RETFDAASSF ASLIDHKNGR LRWAFVVDPQ IRARQISEPD PAFTSEMPSY GTPHPEVYPH 600 RDFIIGEQYV DMVSDWQTIV SSDNDVHEVF KFIAEAILDK AYVVERADGS LGCYNCRTQR 660 KEGEILVTPL EPQIDNLYVC LNNDDKVRFS GRIVRIAKQ 699
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 1 | 699 | 39 | 861 | 0.6724 |
0.7638 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A516PYA3-F1-model_v4 | PL27 | 1 | 694 | 8 | 640 | 0.7554 |
0.8075 |
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 1 | 671 | 4 | 629 | 0.7553 |
0.8084 |
| AF-E0S376-F1-model_v4 | PL27 | 1 | 675 | 5 | 593 | 0.7503 |
0.8264 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 1 | 656 | 1 | 643 | 0.7424 |
0.7848 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 1 | 655 | 7 | 663 | 0.7415 |
0.7805 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 1 | 676 | 8 | 619 | 0.7414 |
0.8046 |
| A0A975CYI3 | PL27 | 1 | 637 | 4 | 598 | 0.7407 |
0.8116 |
| A0A416I060 | PL27 | 1 | 672 | 16 | 651 | 0.7406 |
0.7947 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 1 | 670 | 1 | 655 | 0.7399 |
0.7754 |
| AF-A0A0A7I1G9-F1-model_v4 | PL27 | 1 | 656 | 1 | 655 | 0.7362 |
0.7719 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A516PYA3 | PL27 | 1 | 694 | 8 | 640 | 0.7554 |
0.8075 |
| A0A5P8M7F3 | PL27 | 1 | 671 | 4 | 629 | 0.7553 |
0.8084 |
| E0S376 | PL27 | 1 | 675 | 5 | 593 | 0.7503 |
0.8264 |
| A0A2S0KVT5 | PL27 | 1 | 655 | 7 | 663 | 0.7415 |
0.7805 |
| F5Y9B7 | PL27 | 1 | 676 | 8 | 619 | 0.7414 |
0.8046 |
| A0A975CYI3 | PL27 | 1 | 637 | 4 | 598 | 0.7407 |
0.8116 |
| A0A416I060 | PL27 | 1 | 672 | 16 | 651 | 0.7406 |
0.7947 |
| E3QS34 | PL27 | 1 | 698 | 12 | 702 | 0.7313 |
0.7523 |
| A0A174T7R5 | PL27 | 1 | 656 | 29 | 690 | 0.7306 |
0.782 |
| A0A6I5ZZU4 | PL27 | 1 | 691 | 41 | 717 | 0.7292 |
0.7718 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 1 | 640 | 4 | 669 | 0.7332 |
0.7927 |
| 5nok-assembly1.cif.gz_A | 1 | 640 | 8 | 668 | 0.7265 |
0.7849 |
| 5dgr-assembly1.cif.gz_A | 84 | 652 | 1 | 573 | 0.498 |
0.5618 |
| 5dgr-assembly1.cif.gz_B | 84 | 652 | 1 | 571 | 0.496 |
0.5592 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.