PROTEIN: HRGMv2_3872_32_5
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Protein File & Metadata
Source:
HRGMv2_3872_32_5.pdb
Genome ID:
Protein ID:
HRGMv2_3872_32_5
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Protein Sequence
MSNRRILATV LTLSVASVTM SAHTFYCVEP DGADGKGIQC DITVEKVENR EIVHVVMRNL 60 RHTPFQPVKA GIRLGVDTYM DRYPEWNDKY FPTMMVCEPT HCYGYMQSPS GKVKAIVSDS 120 PVASWSLDYN LGYMEPETYW FYGHRIKSLN LDLLSTQPQP SRHPRSCREL GAGESREWTL 180 QLIDIDGPDD FEKTVHYAAG VPVPMMRRTS CRPGEPIDIT IYGHNPKVKD GSRELPVRAM 240 GHDTWNVVFK KDNPGIYELK INDGDKQTYG YVNVTRPWNE IMRAGRREAL RCRQKASSHV 300 ESWYGFHTAF LAARYFPDHE PDSALSARFD VVAATVFNPE SGRQNRYEWR IQNAFSTVGM 360 FVDRYEAYGN KKDLLMAEKV ADRVISDSQR ADGAFMNGQT DYSSVIYPAK SLLELADAEY 420 SASRRSHGMK YEEAARKAID RLVAMDGNFN TEGEITYEDG MVSCAALQMG AMALRSKDAI 480 KRIRYRDAML KLLDGHDCLT QLRVADGRRR GGTMRFWEAQ YDVHMQPNMI SSPHGWSAWR 540 AYATYYAWLL TGDEKWLAQT FDAAASFAAL VDFSTHRLNW AFVVDPAVNV RQISMPGSTS 600 YGCPHPDMYP HADYTIGERY VPMISDWQTM VSSDNDVHEI FKFIAEAVLT NAFVVERCDG 660 SLGCYNCSAT LQNGILEVTG DEPQITNLYI SGHSDLKVKF NGKIICIEL 709
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 11 | 709 | 28 | 895 | 0.67 |
0.7665 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A516PYA3-F1-model_v4 | PL27 | 10 | 707 | 1 | 640 | 0.7556 |
0.8049 |
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 12 | 682 | 9 | 629 | 0.7551 |
0.8196 |
| AF-E0S376-F1-model_v4 | PL27 | 16 | 686 | 7 | 593 | 0.7474 |
0.8309 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 12 | 687 | 1 | 619 | 0.7417 |
0.8017 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 13 | 666 | 1 | 663 | 0.7414 |
0.787 |
| A0A416I060 | PL27 | 13 | 683 | 10 | 651 | 0.7409 |
0.7932 |
| A0A975CYI3 | PL27 | 14 | 648 | 2 | 598 | 0.7402 |
0.8137 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 18 | 667 | 10 | 643 | 0.7366 |
0.7939 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 18 | 681 | 9 | 655 | 0.7354 |
0.7843 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 6 | 687 | 24 | 716 | 0.7328 |
0.7758 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A516PYA3 | PL27 | 10 | 707 | 1 | 640 | 0.7556 |
0.8049 |
| A0A5P8M7F3 | PL27 | 12 | 682 | 9 | 629 | 0.7551 |
0.8196 |
| E0S376 | PL27 | 16 | 686 | 7 | 593 | 0.7474 |
0.8309 |
| F5Y9B7 | PL27 | 12 | 687 | 1 | 619 | 0.7417 |
0.8017 |
| A0A2S0KVT5 | PL27 | 13 | 666 | 1 | 663 | 0.7414 |
0.787 |
| A0A416I060 | PL27 | 13 | 683 | 10 | 651 | 0.7409 |
0.7932 |
| A0A975CYI3 | PL27 | 14 | 648 | 2 | 598 | 0.7402 |
0.8137 |
| A0A6I5ZZU4 | PL27 | 6 | 687 | 24 | 716 | 0.7328 |
0.7758 |
| E3QS34 | PL27 | 10 | 709 | 3 | 702 | 0.7302 |
0.7474 |
| Q5AWT9 | PL27 | 1 | 668 | 12 | 724 | 0.726 |
0.7878 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 16 | 651 | 15 | 669 | 0.7281 |
0.7971 |
| 5nok-assembly1.cif.gz_A | 16 | 651 | 19 | 668 | 0.7217 |
0.7895 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.