PROTEIN: HRGMv2_3870_7_59
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Protein File & Metadata
Source:
HRGMv2_3870_7_59.pdb
Genome ID:
Protein ID:
HRGMv2_3870_7_59
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Protein Sequence
MKRLVSLDVL RGITVCGMIL VNNAGGSVSY APLRHSVWNG LTPCDLVFPF FLFMVGISTY 60 ISLRKFDFKP SQDVVKKIFR RTVLIILIGL GIEWFGSACK GEFFPIDTLR IPGVLQRIGL 120 CYGIVSLMVI YIRHKYLPWI AGGLLVVYSI ILLTGNGYAC DDTNILAVID RSVFGEAHLY 180 KKSPIDPEGL MSTLPAIAHT LIGFICGKLL LEKISINQRI IKLIAAAVGM LVVGYILSIW 240 LPLNKRVWST SFVLVTCGWG TLLLALLMYV IDVKNVNKGW TFFLVFGMNP LFLYVLSEVV 300 AIAFSQWKIR HAIYYGITQV ITDEYFASLI YALLFCGVMG LIGYILHRKK IYIKI 355
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55C73-F1-model_v4 | 1 | 355 | 43 | 426 | 0.8577 |
0.9433 |
| AF-K7KGM5-F1-model_v4 | 1 | 355 | 27 | 465 | 0.8122 |
0.9298 |
| AF-A0A368UJV1-F1-model_v4 | 1 | 355 | 19 | 455 | 0.8117 |
0.9218 |
| AF-I1NBX1-F1-model_v4 | 1 | 355 | 26 | 464 | 0.8112 |
0.928 |
| AF-Q94CC1-F1-model_v4 | 1 | 355 | 34 | 472 | 0.8065 |
0.9292 |
| AF-B4FES9-F1-model_v4 | 1 | 355 | 40 | 484 | 0.7991 |
0.9301 |
| AF-Q5JK28-F1-model_v4 | 1 | 355 | 50 | 488 | 0.7983 |
0.9321 |
| AF-Q5WMX9-F1-model_v4 | 1 | 355 | 52 | 491 | 0.797 |
0.9329 |
| AF-K7LGV3-F1-model_v4 | 1 | 355 | 52 | 489 | 0.7965 |
0.9309 |
| AF-A0A1D6FME0-F1-model_v4 | 1 | 355 | 55 | 513 | 0.7854 |
0.9355 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 355 | 858 | 1227 | 0.6129 |
0.955 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 355 | 858 | 1227 | 0.6129 |
0.955 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6CK18-F1-model_v4 | 1 | 355 | 113 | 446 | 0.7226 |
0.8643 |
| AF-B3H6K1-F1-model_v4 | 2 | 355 | 104 | 434 | 0.715 |
0.853 |
| AF-Q9UTL4-F1-model_v4 | 1 | 355 | 117 | 459 | 0.7087 |
0.8373 |
| AF-Q754I2-F1-model_v4 | 1 | 355 | 110 | 480 | 0.7002 |
0.8156 |
| AF-Q2UQH4-F1-model_v4 | 1 | 355 | 129 | 500 | 0.697 |
0.8248 |
| AF-Q6FLH2-F1-model_v4 | 1 | 355 | 115 | 486 | 0.6962 |
0.8154 |
| AF-P47026-F1-model_v4 | 1 | 355 | 120 | 490 | 0.6958 |
0.8173 |
| AF-Q873N2-F1-model_v4 | 1 | 355 | 114 | 485 | 0.6952 |
0.8138 |
| AF-Q6CAW6-F1-model_v4 | 1 | 355 | 122 | 478 | 0.6949 |
0.8082 |
| AF-Q3UDW8-F1-model_v4 | 1 | 355 | 258 | 656 | 0.6946 |
0.9063 |