PROTEIN: HRGMv2_3870_43_13
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3870_43_13.pdb
Genome ID:
Protein ID:
HRGMv2_3870_43_13
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MRNRISWLLM ACACVAMPTF AESNPDKSES AEKKGAAIIT IYSDVHSGFG HVNDDRGFGL 60 DRAYLGYQYN LPHGLQMKAV VDFGQSQDVG DYHRIGYIKN AQITWKQKGW TLNAGLISTT 120 QFKLQEDFWG KRYVMKSFQD EYKFGSSADL AFSAAYQFNK VVAADVIVAN GEGYKKVQVK 180 DGLQYGAGVT VTPVKGLVIR AYGSFNEASE DNLKGITNLA AFVGYKNDAF SVAAEYNYQT 240 NAKYVDNHDQ DGISVYASAQ LNKKIGLFGR WDRLSSKSDW NKADDGMASM LGAEFKLGKY 300 VKLAPNFRLW APKADGGKLA SYVYLNASFA I 331
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P43839-F1-model_v4 | 23 | 331 | 4 | 359 | 0.7524 |
0.8532 |
| AF-A0A0H3GIV3-F1-model_v4 | 24 | 331 | 1 | 350 | 0.742 |
0.835 |
| AF-P02932-F1-model_v4 | 25 | 331 | 1 | 351 | 0.742 |
0.8381 |
| AF-P30705-F1-model_v4 | 25 | 331 | 1 | 350 | 0.74 |
0.8343 |
| AF-Q5F5V7-F1-model_v4 | 19 | 331 | 11 | 348 | 0.7392 |
0.8168 |
| AF-P37432-F1-model_v4 | 30 | 331 | 27 | 363 | 0.7355 |
0.8549 |
| AF-Q8ZPH7-F1-model_v4 | 23 | 331 | 1 | 372 | 0.7326 |
0.8435 |
| AF-P21420-F1-model_v4 | 23 | 331 | 1 | 365 | 0.7303 |
0.8343 |
| AF-A0A0H3H0Y2-F1-model_v4 | 24 | 331 | 1 | 367 | 0.728 |
0.8362 |
| AF-Q9S4Z2-F1-model_v4 | 20 | 331 | 35 | 377 | 0.7279 |
0.8344 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A9BG98 | CBM48 | 28 | 331 | 124 | 426 | 0.4645 |
0.5794 |
| A0A484X827 | GH1 | 27 | 331 | 131 | 557 | 0.4485 |
0.7358 |
| QTA38080.1 | CBM48 | 26 | 331 | 313 | 637 | 0.3903 |
0.5547 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3wi5-assembly1.cif.gz_A | 34 | 331 | 1 | 312 | 0.7709 |
0.8461 |
| 3wi4-assembly1.cif.gz_A | 34 | 331 | 1 | 309 | 0.7676 |
0.8388 |
| 5o78-assembly1.cif.gz_C | 31 | 331 | 1 | 331 | 0.758 |
0.849 |
| 4aui-assembly1.cif.gz_C | 34 | 331 | 1 | 308 | 0.7579 |
0.8288 |
| 4kr4-assembly1.cif.gz_C | 30 | 331 | 4 | 334 | 0.7569 |
0.8487 |
| 4kr4-assembly1.cif.gz_A | 29 | 331 | 4 | 339 | 0.7556 |
0.8505 |
| 4kra-assembly1.cif.gz_B | 29 | 331 | 4 | 340 | 0.7555 |
0.8508 |
| 4kr8-assembly1.cif.gz_B | 29 | 331 | 4 | 340 | 0.7551 |
0.8505 |
| 1pho-assembly1.cif.gz_A | 29 | 331 | 5 | 330 | 0.7551 |
0.8389 |
| 6ehe-assembly1.cif.gz_A | 31 | 331 | 1 | 302 | 0.755 |
0.8108 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P30690-F1-model_v4 | 24 | 331 | 12 | 331 | 0.7611 |
0.8333 |
| AF-P57042-F1-model_v4 | 24 | 331 | 12 | 329 | 0.7597 |
0.8301 |
| AF-P30689-F1-model_v4 | 24 | 331 | 12 | 331 | 0.7589 |
0.831 |
| AF-P30688-F1-model_v4 | 24 | 331 | 12 | 331 | 0.7579 |
0.83 |
| AF-P30687-F1-model_v4 | 24 | 331 | 12 | 331 | 0.7566 |
0.829 |
| AF-P05430-F1-model_v4 | 23 | 331 | 12 | 326 | 0.7548 |
0.8194 |
| AF-E6MZM0-F1-model_v4 | 26 | 331 | 13 | 331 | 0.7546 |
0.8319 |
| AF-Q48221-F1-model_v4 | 23 | 331 | 3 | 353 | 0.753 |
0.847 |
| AF-P43839-F1-model_v4 | 23 | 331 | 4 | 359 | 0.7524 |
0.8532 |
| AF-P20149-F1-model_v4 | 23 | 331 | 4 | 361 | 0.75 |
0.8527 |