PROTEIN: HRGMv2_3870_3_107
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Protein File & Metadata
Source:
HRGMv2_3870_3_107.pdb
Genome ID:
Protein ID:
HRGMv2_3870_3_107
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Protein Sequence
MKAEKKQFSN RMGAAVLLLA LACVNGYAQE NKSSNDGSSK EEGNRNVMLN AASANGPREI 60 QIGLPSADVN VLENGVPVTY ATNPHSVNSL WRADASLSHV GLLKISETAI TTGNIGYAVN 120 SFTQLGQKGF NGTLNYKSNH FGMQEISLNL NGEIAKDWFY SGSIYQDFDP GTFKIKSTPF 180 QDRTQIYKFA LTKRYHNNRG EFTAMYHYSN SHPVYMYATQ SAPFVYVGDG SVRELGAFAL 240 GTTSYLPVDN EMIYRDMRTG ELKKTSLYDA VQNKGSEVSL MNNYNWDNGL SWKVIMKYDH 300 ATGSCVYQTP MELSQRANSN INYQYEAENG SMQAYTGDYV QSRMSCLNRG FIDEFMFTTE 360 LSRKLSNGTW RLGLNEWYYD IDYASNTTMY DQSVPLDGSY PVRLYNPGYA TSSRSYDGNG 420 YYYDYNKNAS EYYKGHENKL AVYFTHDWDV TDKFNLYYGA RLEYQALRGN NAAVKDADGN 480 FVGRFADYHL GATAPNGTLI APTPMDYDWF NYALSAAATY KLTKEFGFTG DFTYITQHPK 540 LENFAPAVSP NVDKISVPLG RVGIYYNNEW LSLTSLFSYI SKTNNNSTLN LQHSVNGENE 600 ILAAPLTYDI KTLGWTTDVV THPFKGFDLH FLFTYQKPTY KKYETSVTFS DNYVGQINAT 660 GNIVAEIPQV IVEIDPSYMI TKDLKIWTSF RYFSKTYANI NDAYYFNGRW ETFGGLNWQV 720 NKKLSLGCSV VNFLNQTGAK GSIAGAELVT KEEAGKYANT VMAGSYIRPF TVEFSAQIKF 780
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0CL48-F1-model_v4 | 32 | 780 | 5 | 702 | 0.7438 |
0.7964 |
| AF-Q9I683-F1-model_v4 | 24 | 780 | 44 | 730 | 0.7374 |
0.8176 |
| AF-A0A0H3GUM0-F1-model_v4 | 27 | 780 | 44 | 706 | 0.7367 |
0.8311 |
| AF-Q9HZT6-F1-model_v4 | 26 | 780 | 49 | 718 | 0.7337 |
0.8264 |
| AF-A0A0H3H0D6-F1-model_v4 | 30 | 780 | 27 | 672 | 0.7318 |
0.826 |
| AF-Q0P814-F1-model_v4 | 29 | 780 | 31 | 709 | 0.7294 |
0.8062 |
| AF-A0A0H3GNH3-F1-model_v4 | 27 | 780 | 32 | 709 | 0.7268 |
0.8043 |
| AF-Q9HUX3-F1-model_v4 | 27 | 780 | 46 | 708 | 0.7265 |
0.8207 |
| AF-A0A0H3GPE7-F1-model_v4 | 27 | 780 | 31 | 690 | 0.7256 |
0.8138 |
| AF-Q8ZRQ2-F1-model_v4 | 5 | 780 | 1 | 729 | 0.7237 |
0.7591 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a60-assembly1.cif.gz_A | 33 | 780 | 4 | 677 | 0.758 |
0.8249 |
| 6z8a-assembly1.cif.gz_A | 26 | 780 | 11 | 677 | 0.7577 |
0.8324 |
| 8b14-assembly1.cif.gz_A | 24 | 780 | 1 | 696 | 0.7509 |
0.8041 |
| 4cu4-assembly1.cif.gz_A | 26 | 780 | 1 | 693 | 0.7467 |
0.8013 |
| 2fcp-assembly1.cif.gz_A | 25 | 780 | 1 | 705 | 0.7451 |
0.7935 |
| 5fp1-assembly1.cif.gz_A | 25 | 780 | 1 | 701 | 0.7442 |
0.795 |
| 4epa-assembly1.cif.gz_A | 34 | 780 | 6 | 631 | 0.7439 |
0.8379 |
| 3qlb-assembly2.cif.gz_B | 27 | 780 | 8 | 670 | 0.7373 |
0.8118 |
| 1by5-assembly1.cif.gz_A | 27 | 780 | 8 | 697 | 0.7366 |
0.7966 |
| 6bpo-assembly4.cif.gz_D | 27 | 780 | 2 | 711 | 0.7363 |
0.783 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-E1W8M5-F1-model_v4 | 25 | 780 | 3 | 702 | 0.746 |
0.7964 |
| AF-P0CL48-F1-model_v4 | 32 | 780 | 5 | 702 | 0.7438 |
0.7964 |
| AF-Q01674-F1-model_v4 | 8 | 780 | 6 | 710 | 0.7412 |
0.7916 |
| AF-A1JTG3-F1-model_v4 | 23 | 780 | 20 | 672 | 0.7369 |
0.8236 |
| AF-P0C2M9-F1-model_v4 | 25 | 780 | 22 | 672 | 0.7352 |
0.824 |
| AF-P46359-F1-model_v4 | 30 | 780 | 23 | 672 | 0.7314 |
0.8204 |
| AF-A0A0H2ZI93-F1-model_v4 | 27 | 780 | 46 | 708 | 0.7272 |
0.8214 |
| AF-Q47162-F1-model_v4 | 27 | 780 | 61 | 735 | 0.7265 |
0.8219 |
| AF-Q9HUX3-F1-model_v4 | 27 | 780 | 46 | 708 | 0.7265 |
0.8207 |
| AF-P75780-F1-model_v4 | 16 | 780 | 22 | 760 | 0.7218 |
0.7628 |