PROTEIN: HRGMv2_3870_10_9
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Protein File & Metadata
Source:
HRGMv2_3870_10_9.pdb
Genome ID:
Protein ID:
HRGMv2_3870_10_9
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Protein Sequence
MKNILIVLLW ILFTIVPVYG QGRIVLASDT ENMFLKLPVT VEFVHPNGEK GWYFRGLNSE 60 NDGTYDLRKY YAFRMAVKCK KGTLVNLHCV LWRDTIKEDR HNLVNSTSVS VIVKGTGEWQ 120 EVVIPIASFD YNKGQSYFLK FIKRIVVTID GSSEKVQWKD ASFIKAHSLA LETDVYSRPL 180 DTSLQTEYKV KVTNTSTTSQ SVMLSIRREG WEGMKANVTP SSLFLEPDES AFVTVKVTGS 240 SYLPSGASET TVLQATPLFD NGKTELLELI SVVPVKSPFV VHNKNGWKQV KEKIEKYSWA 300 KNEFDELLRV AESFQVPEVK KGTLSDQGTE GLVRAYIESA LHQTAIAYYL TGNRVYGEKV 360 AETLRRLTDP VLGYPRTQHL TFQGIPQEGG TMEGLLFAYD LIKDSGLLSE DECRDVEYTF 420 RLYCLNVIDM MGDGGISNWS VFNLAPAAEC ALMLHDMHLF NELAYGPCGL IDHLRYGTMD 480 DGWWYEMSLS YNLGCAVCYT TMALAAQAFG IDWLNRKFPS SLTHKVGLRP FESENLQGMK 540 FDKFGPLMHN TIDIKRMWDG ILLYPDYRGV MFGMGDGHEQ MVAGNQFELA YYAFRDPRYA 600 SLLKRSSKRS LIYGVPELPQ DSVDLSSQSG YSDNAGIAVL RSNKGNKKPE ERIQIALKYG 660 THGGYHGHFD RISLLSLMRY GRSFYNPETS WFGYGSYMYK WWVQSSMSHN MVVVDGKMQE 720 PTTCHRLLAY SGKRMQAFAM ATDARWSQPP YMGGYDQIEQ VKRGEAPYVP IPSGEDLPVP 780 GDVGAYSEPV HQRRMAVVTD DYVLIADYLK ADSVHVFDNL WQLRGVTPGG QLHFKNEDAQ 840 WDTNPLSSGQ FITSVKNYFY ENGGLIHSIH HFAPLGKDGM NLAVNHWETG GQNRLYNEPG 900 DLQMDVHLLW PRNTEFRIGD YAEQWGTDKK MKYRILADGK QIAGNVFRPW ILGENQIQVD 960 LQNVKQIVIE VETDRREGKP FSLMLADACV ITRTGKRIHL SSLNPQIENV ALLPHKGKDY 1020 QGGPVKIAGK QYVDVVGIEP VDSKKAARLV YGIEGLDAVR LEGVLGNDFF VGNEEQLRKT 1080 VGVRQKGKEA CFLTLIEPFE KRSMIKSIHV VSANEIEVVL ADGRVQRLYI ENFYGNYNRS 1140 KVRLEEWKDG QLLGRECTHE SK 1162
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D3ZYE3-F1-model_v4 | 133 | 1162 | 40 | 1140 | 0.4552 |
0.5253 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1G7JD53-F1-model_v4 | PL17 | 214 | 1147 | 10 | 716 | 0.6494 |
0.8161 |
| AF-A0A2R3N0X0-F1-model_v4 | PL17_1 | 277 | 1155 | 1 | 678 | 0.6435 |
0.8153 |
| ULL17806.1 | PL17 | 278 | 1137 | 1 | 676 | 0.641 |
0.813 |
| AF-A0A0C5WHL6-F1-model_v4 | PL17_1 | 277 | 1150 | 1 | 669 | 0.641 |
0.8162 |
| G9YC51 | PL17_1 | 277 | 1150 | 1 | 676 | 0.6406 |
0.8125 |
| AF-A0A0C5WHP3-F1-model_v4 | PL17_2 | 178 | 1150 | 1 | 713 | 0.6392 |
0.7951 |
| AF-A0A193KE34-F1-model_v4 | PL17_1 | 277 | 1145 | 1 | 666 | 0.6391 |
0.8151 |
| AF-A0A3G2PWM5-F1-model_v4 | PL17_1 | 277 | 1151 | 1 | 678 | 0.6389 |
0.8096 |
| AF-D9R9B1-F1-model_v4 | PL17_1 | 277 | 1133 | 1 | 665 | 0.637 |
0.8128 |
| AF-W0REI6-F1-model_v4 | PL17_2 | 210 | 1154 | 11 | 730 | 0.6368 |
0.7953 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1G7JD53 | PL17 | 214 | 1147 | 10 | 716 | 0.6494 |
0.8161 |
| A0A2R3N0X0 | PL17_1 | 277 | 1155 | 1 | 678 | 0.6435 |
0.8153 |
| ULL17806.1 | PL17 | 278 | 1137 | 1 | 676 | 0.641 |
0.813 |
| G9YC51 | PL17_1 | 277 | 1150 | 1 | 676 | 0.6406 |
0.8125 |
| A0A1B2DNQ4 | PL17_1 | 277 | 1138 | 1 | 671 | 0.6366 |
0.8098 |
| A0A5B9WR87 | PL35 | 13 | 1159 | 6 | 620 | 0.6365 |
0.839 |
| A0A3G4VHF0 | PL17_1 | 277 | 1151 | 1 | 673 | 0.6341 |
0.8099 |
| A0A7G9NUN4 | PL17 | 247 | 1160 | 27 | 699 | 0.6338 |
0.8231 |
| UKS24731.1 | PL17_1 | 279 | 1147 | 1 | 705 | 0.6324 |
0.7898 |
| I7A024 | PL17_2 | 276 | 1161 | 1 | 705 | 0.6318 |
0.7914 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ok2-assembly1.cif.gz_B | 278 | 1161 | 1 | 702 | 0.6282 |
0.788 |
| 7bjt-assembly1.cif.gz_B | 274 | 1161 | 1 | 723 | 0.6241 |
0.7746 |
| 7bm6-assembly1.cif.gz_B | 273 | 1161 | 1 | 723 | 0.6235 |
0.7739 |
| 6jpn-assembly1.cif.gz_A | 100 | 1162 | 1 | 762 | 0.5974 |
0.7287 |
| 6jph-assembly1.cif.gz_A | 100 | 1162 | 1 | 762 | 0.5971 |
0.7285 |
| 6lja-assembly1.cif.gz_A | 90 | 1162 | 38 | 833 | 0.5761 |
0.7075 |
| 6ljl-assembly1.cif.gz_A | 90 | 1162 | 38 | 833 | 0.5751 |
0.7066 |
| 3afl-assembly1.cif.gz_A | 87 | 1136 | 2 | 766 | 0.5658 |
0.6862 |
| 3a0o-assembly2.cif.gz_B | 72 | 1135 | 1 | 763 | 0.5631 |
0.6836 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B2FSW8-F1-model_v4 | 181 | 1152 | 26 | 741 | 0.6242 |
0.791 |
| AF-T2KNA3-F1-model_v4 | 219 | 1162 | 14 | 809 | 0.6103 |
0.7379 |
| AF-Q9UL01-F1-model_v4 | 244 | 1162 | 34 | 726 | 0.5065 |
0.7574 |
| AF-Q8BLI4-F1-model_v4 | 244 | 1162 | 34 | 726 | 0.5064 |
0.757 |
| AF-Q0VBN2-F1-model_v4 | 133 | 1162 | 37 | 1139 | 0.4566 |
0.5269 |