PROTEIN: HRGMv2_3868_55_2
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Protein File & Metadata
Source:
HRGMv2_3868_55_2.pdb
Genome ID:
Protein ID:
HRGMv2_3868_55_2
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Protein Sequence
MTNHSLSIAG GSEKATYSAG ISYLSQDGIM DVENYYRRLN FRAALEYDAT SWLKVGFNGV 60 FSTSEQQQPK NAAWQQAYNM APIMPVYDKN TTTSKGGWAS PQDLSGISSN LYNPVASANY 120 YDSRNDNYQV LTNFFAQLNL IPSKLNFRTS YSYDYSNIRG TVFTPSYYIS SWQREETNSL 180 EKKNSTYYKG IWDNTLNYND QWGQHKFGAM VGHSTRWENY RYMSGKVSNI PEGADEYQYW 240 DQGNPEGRTL DDDGWSYRGL SFFTRLNYDY AGKYLLMFTM RADGSSKYQE KWGYFPSVGA 300 AWVLSEEEFM DSQDAFDYIK LRASWGRLGN DKVAASDGFA SLSTGNDASG VFNGTVVPGW 360 QNTTYFSWLK WELVDETNVG LQFTTLKNRL DVDVDWFYRM TKNAVVSPQI PMTNEYVAKN 420 TGEILNTGVD LSINWHDKIG DWSYYVGANL SYLHNEVKKL DGGLNLIRGG KTVQMVGEKM 480 NSYYGYKVAG VYQNQAEIDA DPIALANGLE PGDLRYEDVN GDKKIDGLDK QVLGSYVPDF 540 TYGFNVGFSY KNFDFALTTY GQVGGEIWNR KRELRYASNF YNFDLDTYEN RWHGEGTSNT 600 HPSAKGLTKG WNISDSNRSS YYVEKSDFFR IQNITLGYSF KNVKFGSYTM PGIRLSLTAD 660 RPFSTFKANS FTPEVSDPEG WDTEVYPLTA TYTFGVQLDF 700
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32I81-F1-model_v4 | 1 | 700 | 43 | 609 | 0.6392 |
0.7405 |
| AF-Q0P814-F1-model_v4 | 1 | 700 | 182 | 709 | 0.6025 |
0.8001 |
| AF-A0A0H3GNH3-F1-model_v4 | 1 | 700 | 181 | 709 | 0.5966 |
0.7883 |
| AF-Q9I1I6-F1-model_v4 | 1 | 700 | 187 | 708 | 0.5958 |
0.799 |
| AF-A0A0H3GLH7-F1-model_v4 | 1 | 700 | 174 | 729 | 0.5947 |
0.7618 |
| AF-A0A0H3GUM0-F1-model_v4 | 1 | 700 | 193 | 706 | 0.5933 |
0.806 |
| AF-O25573-F1-model_v4 | 42 | 700 | 1 | 562 | 0.5927 |
0.6658 |
| AF-Q5F527-F1-model_v4 | 1 | 700 | 192 | 809 | 0.5922 |
0.7213 |
| AF-Q9HZT6-F1-model_v4 | 1 | 700 | 200 | 718 | 0.5898 |
0.7982 |
| AF-A0A0H3GPE7-F1-model_v4 | 1 | 700 | 167 | 690 | 0.5884 |
0.7755 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A223HUM7 | GH35 | 1 | 700 | 832 | 1571 | 0.6776 |
0.9388 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A223HUM7 | GH35 | 1 | 700 | 832 | 1571 | 0.6776 |
0.9388 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6z8i-assembly1.cif.gz_B | 1 | 700 | 96 | 807 | 0.8378 |
0.9048 |
| 8a9y-assembly1.cif.gz_I | 1 | 700 | 222 | 903 | 0.789 |
0.9167 |
| 8aa4-assembly1.cif.gz_B | 1 | 700 | 195 | 871 | 0.7889 |
0.9092 |
| 6zlt-assembly1.cif.gz_B-2 | 1 | 700 | 222 | 933 | 0.7827 |
0.8997 |
| 6slj-assembly1.cif.gz_A | 1 | 700 | 217 | 898 | 0.7656 |
0.8879 |
| 6sln-assembly1.cif.gz_B | 1 | 700 | 217 | 902 | 0.7649 |
0.8837 |
| 6sli-assembly1.cif.gz_B | 1 | 700 | 217 | 900 | 0.7613 |
0.8815 |
| 6sml-assembly1.cif.gz_B | 1 | 700 | 229 | 911 | 0.7596 |
0.8849 |
| 6sm3-assembly1.cif.gz_B | 1 | 700 | 217 | 903 | 0.7583 |
0.8756 |
| 5fq6-assembly1.cif.gz_M | 1 | 700 | 218 | 948 | 0.7487 |
0.8665 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KM18-F1-model_v4 | 1 | 700 | 287 | 990 | 0.7839 |
0.9222 |
| AF-T2KPJ3-F1-model_v4 | 1 | 700 | 294 | 1001 | 0.77 |
0.9099 |
| AF-T2KMI3-F1-model_v4 | 1 | 700 | 316 | 1038 | 0.761 |
0.9123 |
| AF-Q8A1G1-F1-model_v4 | 1 | 700 | 304 | 1003 | 0.7381 |
0.873 |
| AF-C3LPZ6-F1-model_v4 | 1 | 700 | 168 | 611 | 0.5913 |
0.8614 |
| AF-Q66G57-F1-model_v4 | 1 | 700 | 174 | 624 | 0.5898 |
0.8546 |
| AF-A0A0H2ZI93-F1-model_v4 | 1 | 700 | 188 | 708 | 0.5886 |
0.7907 |
| AF-Q9HUX3-F1-model_v4 | 1 | 700 | 188 | 708 | 0.5873 |
0.7884 |
| AF-P31827-F1-model_v4 | 1 | 700 | 221 | 790 | 0.5847 |
0.7595 |
| AF-E1W8M5-F1-model_v4 | 1 | 700 | 187 | 702 | 0.5833 |
0.7847 |