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PROTEIN: HRGMv2_3868_52_4

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3868_52_4.pdb
Genome ID:
HRGMv2_3868
Protein ID:
HRGMv2_3868_52_4

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKKVFFVAA   VFAALCLNSC   DKNNPDNPIA   GGSGNVLLTT   ALPNATGMDG   TVYMQLIDEP 60
EPGKTMAVDN   KKGINVPFGS   SLPMIIGQEV   YVFPSYHLTM   DKNELIKYRR   ANGVLQIEGS 120
LKLPANNSAN   NLVKISPTKA   YLSLAGLGLI   YIFNPTTMQK   TGEIDLTSLG   IQDNNPDIGI 180
MIERDGYLFA   GLSQMVGGWT   SPKDYKQADV   AVIDTKTDKL   VKMISEKNSG   FSQATRPIDP 240
KSLFMDEKGD   IYISCLGNFG   MVAGHKAGIL   RIKKGETDFD   PTYHWTITGA   SIKGEEKAAG 300
FPASICYVAN   GKAYGYIDIP   GYYKPGEAGT   TSISNRAVVF   DLYNQTLEKI   DGLELSNGYG 360
IFVSKYKDGL   AIANASTTTK   GVYYLNPQTS   EVNPTPMITA   IGNPMGIERF   DD 412
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0EMN0-F1-model_v4 33 410 40 382 0.6655 0.7823
AF-U7PZM1-F1-model_v4 34 411 17 407 0.6559 0.7275
AF-A0A0H3GKY3-F1-model_v4 63 412 36 328 0.6318 0.8312
AF-P76116-F1-model_v4 33 412 28 324 0.6304 0.812
AF-U7PNC4-F1-model_v4 34 411 40 415 0.629 0.7072
AF-Q32F51-F1-model_v4 32 412 27 326 0.6287 0.8019
AF-A0A0H3GTG8-F1-model_v4 33 412 28 326 0.6285 0.8049
AF-Q8ZPD6-F1-model_v4 33 412 29 324 0.6266 0.8096
AF-B5DEY5-F1-model_v4 59 412 38 319 0.6109 0.8218
AF-Q944S2-F1-model_v4 33 395 50 369 0.597 0.7537
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A517SWL3-F1-model_v4 PL25 20 412 18 418 0.582 0.6642
AF-A0A7T7L3L5-F1-model_v4 GH0 62 412 32 470 0.5792 0.743
AF-A0A517VEX0-F1-model_v4 GH0 59 411 43 390 0.554 0.6507
A0A9W6KQ19 CBM2 43 412 104 578 0.5244 0.6907
AF-A0A2K8U3K9-F1-model_v4 GH0 26 412 302 792 0.4717 0.6633
AF-A0A7I7QS08-F1-model_v4 GH16_3 61 412 129 405 0.4656 0.8366
A0A9E6UM96 CBM47 34 404 497 877 0.4326 0.6998
AF-A0A6M4X331-F1-model_v4 GH84 33 411 702 995 0.4296 0.8257
AF-A0A5P8JXU3-F1-model_v4 GH84 33 412 747 1041 0.4278 0.8334
AF-C7Q9G7-F1-model_v4 GH92 2 412 3 1188 0.423 0.6329
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
G1XH68 CBM1 33 412 19 379 0.6204 0.7689
BCS39880.1 PL22 1 412 20 376 0.6136 0.6938
A0A517SWL3 PL25 20 412 18 418 0.582 0.6642
UXX80601.1 GH33 49 411 27 368 0.5795 0.6784
A0A385BQY1 GH33 36 390 39 360 0.5648 0.6872
A0A9E8YI67 PL42 61 412 35 434 0.5332 0.6692
QIB47538.1 CBM13 33 412 6 328 0.53 0.7759
A0A9W6KQ19 CBM2 43 412 104 578 0.5244 0.6907
A0A0H4P7Q6 GH33 16 412 312 714 0.4727 0.627
A0A7I7QS08 GH16_3 61 412 129 405 0.4656 0.8366
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
8okv-assembly4.cif.gz_D 32 410 1 322 0.7305 0.836
3dsm-assembly1.cif.gz_A 33 412 1 322 0.7279 0.839
4qrj-assembly2.cif.gz_B 34 410 3 343 0.6882 0.775
3scy-assembly1.cif.gz_A 34 411 8 356 0.6825 0.7651
2hxc-assembly1.cif.gz_A 22 412 1 359 0.6799 0.7493
7seu-assembly4.cif.gz_D 57 412 1 295 0.658 0.8081
1mae-assembly1.cif.gz_H 23 412 20 373 0.6577 0.7466
7seu-assembly1.cif.gz_A 60 412 1 293 0.6505 0.8123
3ow8-assembly2.cif.gz_B 35 388 21 292 0.6497 0.8265
3ow8-assembly1.cif.gz_A 35 388 22 293 0.6488 0.8267
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q6G811-F1-model_v4 34 409 1 342 0.7034 0.7872
AF-Q7A4P4-F1-model_v4 34 409 1 342 0.702 0.7858
AF-Q2YU76-F1-model_v4 34 409 1 342 0.7019 0.7857
AF-Q6GFD5-F1-model_v4 34 409 1 342 0.7014 0.7853
AF-Q5HEJ8-F1-model_v4 34 409 1 342 0.7012 0.7851
AF-Q2FFH4-F1-model_v4 34 409 1 342 0.7008 0.7847
AF-Q2FWX8-F1-model_v4 34 409 1 342 0.7006 0.7844
AF-Q8NVS2-F1-model_v4 34 409 1 342 0.7004 0.7842
AF-Q8K9N9-F1-model_v4 34 412 2 333 0.6996 0.795
AF-Q4L7N4-F1-model_v4 34 410 2 344 0.6987 0.7824
Download Full SwissProt Results