PROTEIN: HRGMv2_3868_33_12
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Protein File & Metadata
Source:
HRGMv2_3868_33_12.pdb
Genome ID:
Protein ID:
HRGMv2_3868_33_12
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Protein Sequence
MTQSKRLLSI DVLRGLTIFG MILVNQAGAC GYAYAPLRHA KWDGFTPADL VFPAFMVVMG 60 MSIFLSLNKN GFDFKSSIGH ILKRTALIIL VGVVLKWVLS FIETGTMNTL DNLRLMGVLQ 120 RLGICYGIVA VMGVTIKHRL FPIIAAMLLL AYFMLQVFFN GFEKCADNIV SIVDYAVLGQ 180 SHMYLQGSQF VDPEGVLSTL PAVAQVMIGF CIGRIVAGKC GGEHKTMIVA LIGAALLIAG 240 YLWSFGCPIN KRLWSPSFTL VTSGSTVLLL AIMMYVVDLR EYKRWSFPFK VVGVNPLFIY 300 VLSEMAGDAL RRFGINDFLF QEALQPVFGN YLGSLMYAVM LFASIWAIAY VMYKKKIFIK 360 L 361
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55C73-F1-model_v4 | 1 | 361 | 39 | 426 | 0.8409 |
0.9206 |
| AF-A0A368UJV1-F1-model_v4 | 1 | 361 | 12 | 455 | 0.8286 |
0.9329 |
| AF-I1NBX1-F1-model_v4 | 1 | 361 | 23 | 464 | 0.8225 |
0.9335 |
| AF-K7KGM5-F1-model_v4 | 1 | 361 | 24 | 465 | 0.8218 |
0.9335 |
| AF-Q94CC1-F1-model_v4 | 1 | 361 | 29 | 472 | 0.8211 |
0.9383 |
| AF-B4FES9-F1-model_v4 | 1 | 361 | 37 | 484 | 0.8105 |
0.9362 |
| AF-Q5WMX9-F1-model_v4 | 1 | 361 | 49 | 491 | 0.8073 |
0.9379 |
| AF-Q5JK28-F1-model_v4 | 1 | 361 | 47 | 488 | 0.8064 |
0.9347 |
| AF-K7LGV3-F1-model_v4 | 1 | 361 | 49 | 489 | 0.8057 |
0.9348 |
| AF-A0A1D6FME0-F1-model_v4 | 1 | 361 | 50 | 513 | 0.7932 |
0.9382 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 361 | 561 | 1227 | 0.6105 |
0.9477 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 361 | 561 | 1227 | 0.6105 |
0.9477 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6CK18-F1-model_v4 | 2 | 361 | 111 | 446 | 0.7278 |
0.8726 |
| AF-B3H6K1-F1-model_v4 | 5 | 361 | 104 | 434 | 0.7136 |
0.8573 |
| AF-Q9UTL4-F1-model_v4 | 1 | 361 | 113 | 459 | 0.7131 |
0.8404 |
| AF-Q754I2-F1-model_v4 | 1 | 361 | 105 | 480 | 0.701 |
0.8108 |
| AF-Q2UQH4-F1-model_v4 | 1 | 361 | 125 | 500 | 0.7005 |
0.823 |
| AF-Q6BTT3-F1-model_v4 | 1 | 361 | 113 | 493 | 0.6987 |
0.8167 |
| AF-Q6FLH2-F1-model_v4 | 1 | 361 | 112 | 486 | 0.697 |
0.8106 |
| AF-Q873N2-F1-model_v4 | 1 | 361 | 111 | 485 | 0.6969 |
0.8098 |
| AF-P47026-F1-model_v4 | 1 | 361 | 117 | 490 | 0.696 |
0.8118 |
| AF-Q7TSN4-F1-model_v4 | 2 | 361 | 121 | 502 | 0.6956 |
0.8211 |