PROTEIN: HRGMv2_3868_2_63
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Protein File & Metadata
Source:
HRGMv2_3868_2_63.pdb
Genome ID:
Protein ID:
HRGMv2_3868_2_63
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Protein Sequence
MRNFNRTLPV LCVFLICLIV RAYWISRKSA IDGDEHTSLI LAYNAPGWAD YTYENNRIYT 60 ADELRKNLLT DNVGGMKGYC EDIKALWNDN RDPSHASLYY MLLRTSLIGS DSPSVRAVII 120 RGCGLNLVLF ALSFFLLSEI LKRSIPGRHR LRALLLLLAY LAPITVSNTL LLREYQLAEC 180 LILAFGLFAL TLHSKVSDGK DIISFKNLSV GSVLCALLVS AGYFNAFFAI MAGIVICHAA 240 KRRRLPAICY LLLVAGFTML IAAGLYKGFF NFFSDVRTAE VLDKAQGTSF TANLLASVKA 300 GMKMLFYNVW GPAISVWAAA VVCVFFLKRK SIRLDGFRGK RLWLFAAACL WIAIVLFFST 360 WKMTRYIAPC APLFSAFSIM IVLKMSSGIL KKWIWLPFAM TIVYSLSGYR IEYLQQENAE 420 SVYWPENATR LFLYGPDNDE RKTLTLLVPY LNDKQECIIL DKVEDFHRFV HPSDSIVYVF 480 ANTEPQTYLT FPEFEQKLFF NHWQNIYVYR PD 512
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUZ2-F1-model_v4 | 5 | 512 | 5 | 476 | 0.6884 |
0.7414 |
| AF-Q8ZP99-F1-model_v4 | 1 | 512 | 11 | 508 | 0.6878 |
0.7278 |
| AF-Q9CC27-F1-model_v4 | 2 | 512 | 24 | 527 | 0.6751 |
0.7158 |
| AF-A0A0K0DXE0-F1-model_v4 | 7 | 511 | 1 | 492 | 0.673 |
0.7071 |
| AF-B1WBY3-F1-model_v4 | 1 | 512 | 2 | 488 | 0.6712 |
0.7096 |
| AF-O06152-F1-model_v4 | 1 | 512 | 49 | 556 | 0.6632 |
0.7139 |
| AF-G5EDN2-F1-model_v4 | 4 | 512 | 1 | 495 | 0.6552 |
0.6878 |
| AF-A0A0H3GZQ8-F1-model_v4 | 4 | 511 | 1 | 549 | 0.6518 |
0.699 |
| AF-A0A5K4FC45-F1-model_v4 | 5 | 512 | 1 | 519 | 0.6483 |
0.6809 |
| AF-K0F7B2-F1-model_v4 | 3 | 510 | 8 | 477 | 0.6464 |
0.709 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A1K843 | GT0 | 1 | 512 | 9 | 515 | 0.7242 |
0.7525 |
| AF-A1K843-F1-model_v4 | GT0 | 1 | 512 | 9 | 515 | 0.7242 |
0.7525 |
| A0A543NUS7 | GT83 | 7 | 511 | 1 | 475 | 0.7201 |
0.7655 |
| BCY11543.1 | GT83 | 1 | 512 | 5 | 473 | 0.7166 |
0.7719 |
| AF-A0A1Z2KV33-F1-model_v4 | GT83 | 7 | 511 | 1 | 473 | 0.7163 |
0.763 |
| AF-I4BYW5-F1-model_v4 | GT83 | 1 | 512 | 3 | 492 | 0.7105 |
0.7505 |
| AF-A0A6F8YMS7-F1-model_v4 | GT83 | 16 | 512 | 1 | 452 | 0.7068 |
0.7701 |
| AF-A0A0X3BL36-F1-model_v4 | GT0 | 1 | 510 | 32 | 510 | 0.7057 |
0.7684 |
| AF-H6MRT8-F1-model_v4 | GT83 | 1 | 512 | 8 | 507 | 0.7054 |
0.7394 |
| AF-A0A2D1I4Z7-F1-model_v4 | GT83 | 1 | 512 | 38 | 485 | 0.7051 |
0.8002 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A919H1R8 | GT83 | 4 | 512 | 1 | 483 | 0.724 |
0.7661 |
| A0A7D3ZKU3 | GT83 | 11 | 511 | 1 | 460 | 0.7202 |
0.7758 |
| A0A543NUS7 | GT83 | 7 | 511 | 1 | 475 | 0.7201 |
0.7655 |
| Q1IJH5 | GT83 | 2 | 512 | 12 | 483 | 0.7174 |
0.7719 |
| BCY11543.1 | GT83 | 1 | 512 | 5 | 473 | 0.7166 |
0.7719 |
| I4BYW5 | GT83 | 1 | 512 | 3 | 492 | 0.7105 |
0.7505 |
| BCJ47008.1 | GT83 | 2 | 512 | 11 | 471 | 0.7091 |
0.7712 |
| A0A3S9W690 | GT83 | 1 | 512 | 8 | 511 | 0.7075 |
0.7379 |
| A0A6F8YMS7 | GT83 | 16 | 512 | 1 | 452 | 0.7068 |
0.7701 |
| A0A3T1AZA5 | GT83 | 1 | 512 | 13 | 485 | 0.7067 |
0.7618 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67601-F1-model_v4 | 6 | 511 | 1 | 416 | 0.6949 |
0.7832 |
| AF-Q1MLH5-F1-model_v4 | 5 | 511 | 1 | 466 | 0.6715 |
0.7266 |
| AF-A8FRR0-F1-model_v4 | 5 | 512 | 4 | 546 | 0.6655 |
0.7104 |
| AF-Q7N3Q9-F1-model_v4 | 1 | 511 | 1 | 550 | 0.6632 |
0.7084 |
| AF-A1JPM4-F1-model_v4 | 2 | 511 | 1 | 551 | 0.661 |
0.7077 |
| AF-Q1CIH9-F1-model_v4 | 1 | 511 | 1 | 551 | 0.6609 |
0.7064 |
| AF-B2K5L1-F1-model_v4 | 2 | 511 | 2 | 551 | 0.6604 |
0.7068 |
| AF-A9R091-F1-model_v4 | 1 | 511 | 1 | 551 | 0.6593 |
0.7047 |
| AF-Q8ZDX9-F1-model_v4 | 1 | 511 | 1 | 551 | 0.6592 |
0.7044 |
| AF-A8GDR9-F1-model_v4 | 2 | 511 | 1 | 552 | 0.6589 |
0.7058 |