PROTEIN: HRGMv2_3868_1_37
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3868_1_37.pdb
Genome ID:
Protein ID:
HRGMv2_3868_1_37
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNVLNSFVKL KRYCEAEGFK GWDPYDGLNS RVFQAIPFLK KSAICRLVVI QGFKRCPFNL 60 RRIALVPKEH NAKGIGLFLQ GYCNLYRAVA SNPALANELG TEENLLDRIR ELADLLISLR 120 SEGDYHGACW GYNFDWQARR LFLFPKYTPT VVATNFCATA LMEANEITKD SRYLDIALSA 180 AEFVMNDLHR AKCNDGYLFS YSPLQGNDTV FNASLLGSKL LSCCYRYTKQ EKYKEAARQS 240 VMACCNHQGK DGSWVYGMLP VQSWIDSFHT GYNLDGLIAY EEQTGDRSFH SNIENGFKFY 300 IENFFEEDGC PKYYHNSKYP IDIHCPGQLF VTLHRLHKFE ANRNLAEKVL GWTIKNMQDK 360 KGYFYYQMKE GVSSKISYMR WSNAFMFNAL SYYILSRCKT TE 402
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C0NBR6-F1-model_v4 | 1 | 399 | 15 | 382 | 0.6958 |
0.7579 |
| AF-C1H4M4-F1-model_v4 | 1 | 400 | 19 | 384 | 0.6895 |
0.7567 |
| AF-A0A175W9U6-F1-model_v4 | 1 | 398 | 28 | 393 | 0.6825 |
0.7575 |
| AF-Q59XS8-F1-model_v4 | 1 | 397 | 39 | 412 | 0.6768 |
0.7489 |
| AF-B0S6K7-F1-model_v4 | 1 | 402 | 8 | 399 | 0.669 |
0.7105 |
| AF-P51606-F1-model_v4 | 1 | 402 | 20 | 409 | 0.654 |
0.7144 |
| AF-A0A1D8PFZ7-F1-model_v4 | 1 | 396 | 84 | 447 | 0.645 |
0.7586 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D1C7D3-F1-model_v4 | GH76 | 1 | 397 | 6 | 349 | 0.7504 |
0.8306 |
| AF-A0A386HNT8-F1-model_v4 | GH76 | 1 | 400 | 44 | 399 | 0.7433 |
0.8462 |
| AF-A0A1Q2HN47-F1-model_v4 | GH76 | 1 | 402 | 12 | 360 | 0.7421 |
0.8228 |
| A0A4Q7MQQ1 | GH76 | 1 | 401 | 21 | 360 | 0.7405 |
0.8414 |
| AF-A0A858RQI1-F1-model_v4 | GH76 | 1 | 401 | 16 | 363 | 0.739 |
0.8351 |
| AF-A0A6I4HZL1-F1-model_v4 | GH76 | 1 | 397 | 46 | 402 | 0.7387 |
0.8427 |
| AF-A0A1W6EBY8-F1-model_v4 | GH76 | 1 | 397 | 45 | 403 | 0.7378 |
0.8384 |
| AF-I0KBV6-F1-model_v4 | GH76 | 1 | 397 | 46 | 404 | 0.7374 |
0.8388 |
| AF-A0A5B8UVH7-F1-model_v4 | GH76 | 1 | 402 | 23 | 360 | 0.7374 |
0.8417 |
| AF-A0A679HST2-F1-model_v4 | GH76 | 4 | 397 | 1 | 365 | 0.735 |
0.7896 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D1C7D3 | GH76 | 1 | 397 | 6 | 349 | 0.7504 |
0.8306 |
| A0A4Q7MQQ1 | GH76 | 1 | 401 | 21 | 360 | 0.7405 |
0.8414 |
| A0A3T2KGU8 | GH76 | 1 | 398 | 1 | 342 | 0.7391 |
0.8163 |
| A0A858RQI1 | GH76 | 1 | 401 | 16 | 363 | 0.739 |
0.8351 |
| A0A068NWE0 | GH76 | 1 | 400 | 16 | 360 | 0.7385 |
0.8275 |
| A0A0P0NMG4 | GH76 | 13 | 398 | 1 | 316 | 0.7361 |
0.8406 |
| W0F1F9 | GH76 | 1 | 402 | 27 | 363 | 0.7355 |
0.8452 |
| A0A6P2FGT8 | GH105 | 1 | 402 | 4 | 344 | 0.7338 |
0.8138 |
| A0A416HUP6 | GH76 | 1 | 401 | 2 | 339 | 0.7316 |
0.8134 |
| A0A1W6LJG0 | GH76 | 1 | 402 | 26 | 375 | 0.7285 |
0.8241 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4v1s-assembly1.cif.gz_A | 1 | 401 | 7 | 359 | 0.7488 |
0.8207 |
| 3k7x-assembly1.cif.gz_A | 1 | 402 | 1 | 346 | 0.7391 |
0.8144 |
| 4mu9-assembly2.cif.gz_B | 2 | 397 | 3 | 359 | 0.7371 |
0.8013 |
| 4mu9-assembly1.cif.gz_A | 2 | 397 | 3 | 360 | 0.7367 |
0.7999 |
| 4c1s-assembly2.cif.gz_B | 1 | 401 | 1 | 375 | 0.7362 |
0.7815 |
| 5zhb-assembly1.cif.gz_A | 1 | 401 | 4 | 380 | 0.728 |
0.7744 |
| 5zhb-assembly2.cif.gz_B | 1 | 401 | 4 | 379 | 0.7267 |
0.7742 |
| 7d5g-assembly1.cif.gz_A | 1 | 400 | 6 | 389 | 0.7147 |
0.7551 |
| 3vw5-assembly3.cif.gz_C | 1 | 401 | 2 | 388 | 0.714 |
0.75 |
| 3wkf-assembly1.cif.gz_A | 1 | 402 | 13 | 405 | 0.7118 |
0.7517 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0DKY4-F1-model_v4 | 1 | 401 | 2 | 388 | 0.715 |
0.7511 |
| AF-E6UB41-F1-model_v4 | 1 | 401 | 2 | 388 | 0.7148 |
0.7509 |
| AF-Q5LH66-F1-model_v4 | 1 | 399 | 5 | 392 | 0.7143 |
0.7501 |
| AF-F8WRK9-F1-model_v4 | 1 | 402 | 15 | 407 | 0.7075 |
0.7513 |
| AF-B3XZI5-F1-model_v4 | 1 | 401 | 1 | 404 | 0.705 |
0.7296 |
| AF-B8DZK4-F1-model_v4 | 1 | 400 | 6 | 389 | 0.7041 |
0.7452 |
| AF-P29954-F1-model_v4 | 1 | 402 | 8 | 387 | 0.6936 |
0.7411 |
| AF-P51606-F1-model_v4 | 1 | 402 | 20 | 409 | 0.654 |
0.7144 |
| AF-Q2KIS1-F1-model_v4 | 1 | 402 | 20 | 409 | 0.6487 |
0.7123 |
| AF-L7P9J4-F1-model_v4 | 1 | 401 | 28 | 377 | 0.6405 |
0.7258 |