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PROTEIN: HRGMv2_3868_1_36

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3868_1_36.pdb
Genome ID:
HRGMv2_3868
Protein ID:
HRGMv2_3868_1_36

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKLILNTLK   YGLRSYPVIK   PYLKRIDTLY   TMTQQEIEDY   NNRQFLELIN   LAYSRSKFYH 60
NFYDAHGIDI   KAIKSIDDIS   MLPITDKSII   RENANDIAIG   CKATLFKAAT   SGSTGEPLTI 120
RQNYKAILTK   QAYLHKYRSH   CGFHYGEPLV   SLRGHLDSNT   FKLKVKNGNI   LYLSSYQINP 180
LKANDYYNEI   IEHAPKAIEG   YPSSIYNLCC   ILRDNGLKLN   IPLCFTSSET   LYDFQRKLFH 240
EILNCETYDW   YGCTELSICL   SESKNHDGYF   EAPGYSFNEY   NENSIITTSF   INPRFPLIRY 300
QVNDRISLKP   DYLRINAIDP   NIKTIEGRTE   NSIITKSGTI   IGRLNFLFKE   INYIKLAQIV 360
QREKGTIEIN   IVPDGPFGEA   EKSKITKHIE   DRIGLSDIDF   RINIVSDSEI   IYTKRNKFNQ 420
VVKL 424
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P76085-F1-model_v4 23 424 5 434 0.691 0.7548
AF-A0A0H3GS56-F1-model_v4 23 424 5 434 0.6899 0.7544
AF-K0EQD5-F1-model_v4 32 423 13 485 0.6024 0.7062
AF-Q8ZR32-F1-model_v4 1 424 47 536 0.4809 0.5481
AF-A0A0D2GPQ4-F1-model_v4 1 424 45 545 0.4769 0.5519
AF-A0A1C1CMF0-F1-model_v4 1 424 77 601 0.4672 0.5604
AF-O70490-F1-model_v4 1 424 73 572 0.4618 0.5408
AF-A0A0H3GRA0-F1-model_v4 1 417 7 427 0.4614 0.4863
AF-Q8K0L3-F1-model_v4 1 424 79 575 0.4612 0.5411
AF-Q3UNX5-F1-model_v4 17 424 1 580 0.4612 0.5605
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A4P2R335-F1-model_v4 GT2 8 424 287 725 0.6822 0.8898
AF-A0A2L0F8F1-F1-model_v4 GT2 8 424 306 744 0.6606 0.8693
AF-A0A6G7YF71-F1-model_v4 GT2 8 419 284 724 0.5781 0.7555
A0A915XJC2 GT2 8 406 9 607 0.5753 0.7862
AF-A0A387B7M2-F1-model_v4 GT2 8 418 287 727 0.573 0.7546
AF-S4Y6L4-F1-model_v4 GT2 8 418 287 727 0.5714 0.7553
AF-A9FBI0-F1-model_v4 GT2 8 418 286 727 0.5689 0.752
AF-A0A4P2QA51-F1-model_v4 GT2 8 418 286 727 0.5644 0.7545
AF-A0A0K1EPJ6-F1-model_v4 GT2 8 418 344 786 0.558 0.7547
AF-A0A4P7XK67-F1-model_v4 GT4 11 419 385 821 0.5492 0.7521
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A915XJC2 GT2 8 406 9 607 0.5753 0.7862
A0A387B7M2 GT2 8 418 287 727 0.573 0.7546
A0A0K1EPJ6 GT2 8 418 344 786 0.558 0.7547
A0A4P7XK67 GT4 11 419 385 821 0.5492 0.7521
USX17773.1 GT4 9 418 398 833 0.5441 0.7482
A0A1Y0I9L4 GT4 10 419 413 847 0.5353 0.7395
AZD55811.1 GT2 30 416 350 677 0.4779 0.7479
A0A5S9IQ86 GT2 1 411 27 462 0.3767 0.4901
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2y4o-assembly1.cif.gz_B 16 424 1 432 0.6943 0.7436
4r1m-assembly2.cif.gz_C 23 424 6 431 0.6888 0.7479
4r1m-assembly1.cif.gz_A 23 423 6 433 0.6855 0.7493
4r1l-assembly1.cif.gz_A 24 423 6 431 0.6838 0.7479
6he0-assembly1.cif.gz_A-2 18 423 12 464 0.6561 0.7394
4rvn-assembly1.cif.gz_B 23 424 3 424 0.6298 0.675
2y27-assembly1.cif.gz_A 26 424 1 424 0.6296 0.6793
4r1l-assembly3.cif.gz_B 23 424 2 422 0.6291 0.673
4rvo-assembly1.cif.gz_B 23 424 3 428 0.6274 0.675
2y4n-assembly1.cif.gz_B 23 424 1 423 0.6274 0.672
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P39860-F1-model_v4 1 418 5 449 0.704 0.7467
AF-P76085-F1-model_v4 23 424 5 434 0.691 0.7548
AF-Q9L9C1-F1-model_v4 24 423 9 437 0.6863 0.755
AF-P29334-F1-model_v4 21 355 19 362 0.6408 0.766
AF-P14286-F1-model_v4 19 329 18 354 0.637 0.8206
AF-Q72K16-F1-model_v4 23 424 2 444 0.6251 0.6851
AF-O33469-F1-model_v4 24 418 10 438 0.6235 0.6898
AF-E2JA32-F1-model_v4 25 421 1 393 0.5952 0.6345
AF-P18204-F1-model_v4 34 424 6 395 0.5593 0.6011
AF-C3PCK3-F1-model_v4 1 424 60 482 0.4802 0.5286
Download Full SwissProt Results