dbCAN Logo

PROTEIN: HRGMv2_3864_2_80

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_3864_2_80.pdb
Genome ID:
HRGMv2_3864
Protein ID:
HRGMv2_3864_2_80

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKPTLFLLAA   GMGSRYGGLK   QLDTLGPQGQ   TIMDYSIYDA   INAGFGKLVF   VIRKDFEDDF 60
RKIVLTKYQD   KIPCELVFQS   LDALPEGFTC   PAERQKPWGT   NHALMMGQDV   IKEPFAVLNC 120
DDFYDRDAFQ   VMGKFLSSLP   EGSTGRYAMV   GFRVGNTLSD   SGTVSRGVCE   VDEKNHLTSV 180
VERTKIERHD   GTVQYLDENN   EWVSIPDTTP   VSMNFWGFTP   DYFAHSNEFF   KAFLSDPKNI 240
ENLKSEFFIP   LMVDDLIRKG   QATCEVLDTT   SKWFGVTYPE   DRPEVVAKFA   KLGADGVYPE 300
KMF 303
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0EXU8-F1-model_v4 3 300 1 242 0.7295 0.8337
AF-Q5FAG2-F1-model_v4 2 293 1 231 0.72 0.8358
AF-Q0P8J1-F1-model_v4 3 289 1 221 0.7178 0.8486
AF-Q9I5U0-F1-model_v4 3 294 1 224 0.7143 0.8397
AF-P14183-F1-model_v4 3 301 1 233 0.7079 0.8223
AF-A0A133CIA9-F1-model_v4 3 303 1 252 0.6955 0.8285
AF-Q58730-F1-model_v4 1 295 1 270 0.6943 0.7696
AF-Q8CWT6-F1-model_v4 3 303 1 252 0.6937 0.8278
AF-Q32EG4-F1-model_v4 1 303 1 255 0.6936 0.823
AF-K0ETZ0-F1-model_v4 1 295 6 285 0.6927 0.7614
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A7K1WXA4 GT2 1 303 1 290 0.7513 0.7906
AF-A0A6G8JI42-F1-model_v4 GT8 1 303 4 267 0.5731 0.6408
A0A7X1HNF2 GT2 2 279 1 210 0.5426 0.7316
AF-A0A6P1EAH9-F1-model_v4 GT2 1 281 3 225 0.5303 0.6926
AF-D3TQB2-F1-model_v4 GT8 1 300 44 356 0.5281 0.6001
AF-A0A023Y7C2-F1-model_v4 GT2 1 278 2 222 0.5243 0.6921
UFH54288.1 GT2 1 281 6 218 0.5219 0.7098
AF-A0A6F9DER2-F1-model_v4 GT8 1 303 83 360 0.5198 0.6456
AF-A0A4P6ESI4-F1-model_v4 GT2 1 303 314 566 0.5197 0.8224
AF-A0A7Z2GKH1-F1-model_v4 GT2 1 278 1 220 0.5195 0.7203
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A7K1WXA4 GT2 1 303 1 290 0.7513 0.7906
A0A8D5JT12 GT2 1 300 2 325 0.5732 0.7183
A0A090AI64 GT2 1 300 1 321 0.5657 0.7074
A0A075GTN1 GT2 1 300 2 324 0.5584 0.7009
B0STX1 GT2 1 300 3 330 0.5557 0.7021
A0A7X1HNF2 GT2 2 279 1 210 0.5426 0.7316
E3GE01 GT8 1 301 1 274 0.5381 0.6255
A0A397WL18 GT8 1 292 2 272 0.5381 0.6322
X5DLA8 GT8 1 298 6 278 0.5296 0.6251
C9MPZ5 GT2 1 279 3 217 0.5262 0.7335
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3pnn-assembly1.cif.gz_A 1 303 2 301 0.9573 0.9729
3hl3-assembly1.cif.gz_A 1 303 1 243 0.7403 0.8465
4jd0-assembly1.cif.gz_A 1 303 4 245 0.739 0.8458
5ids-assembly1.cif.gz_B 1 303 1 283 0.7117 0.7603
3juk-assembly1.cif.gz_D 1 294 1 264 0.7093 0.7774
4y7u-assembly1.cif.gz_A 3 294 1 224 0.7091 0.8343
3pkp-assembly1.cif.gz_A 1 303 2 255 0.7085 0.8398
4y7t-assembly1.cif.gz_A 3 294 1 218 0.7079 0.8416
5xhw-assembly1.cif.gz_A 2 290 1 225 0.7056 0.8297
2xmh-assembly2.cif.gz_C 1 277 1 201 0.7051 0.8657
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P39629-F1-model_v4 3 299 1 245 0.7489 0.8483
AF-D4GYH1-F1-model_v4 3 297 1 242 0.7398 0.8438
AF-Q9AGY6-F1-model_v4 2 299 1 230 0.7245 0.8426
AF-Q9JXY0-F1-model_v4 2 293 1 231 0.7189 0.8348
AF-Q9I5U0-F1-model_v4 3 294 1 224 0.7143 0.8397
AF-Q88QT2-F1-model_v4 3 294 1 223 0.7124 0.8391
AF-P55625-F1-model_v4 1 296 4 244 0.7096 0.8166
AF-Q7NGU6-F1-model_v4 3 301 1 233 0.7063 0.8178
AF-Q9A2M1-F1-model_v4 1 292 3 242 0.7057 0.811
AF-P30522-F1-model_v4 1 281 3 250 0.7039 0.7961
Download Full SwissProt Results