Genome Details
Selected Rep_genome_ID: HRGMv2_3864
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp905369775
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| ChuDM_2017_SRR8942345_bin.2 | 2,438,419 | 97.33% | 0.57% | US | North America | ELGG |
| HRGMv2_3864 | 2,351,854 | 97.7% | 0% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3864_CGC26 | CGCFAM_00135 | Yes | 4 | 1 | |
| HRGMv2_3864_CGC9 | CGCFAM_00589 | Yes | 4 | 1 | |
| HRGMv2_3864_CGC17 | CGCFAM_00713 | Yes | 4 | 1 | |
| HRGMv2_3864_CGC22 | CGCFAM_01701 | Yes | 5 | 2 | |
| HRGMv2_3864_CGC3 | CGCFAM_02178 | Yes | 4 | 1 | |
| HRGMv2_3864_CGC24 | CGCFAM_03155 | Yes | 5 | 1 | |
| HRGMv2_3864_CGC20 | CGCFAM_03242 | Yes | 4 | 1 | |
| HRGMv2_3864_CGC5 | CGCFAM_03397 | Yes | 7 | 1 | |
| HRGMv2_3864_CGC12 | CGCFAM_05876 | Yes | 4 | 1 | |
| HRGMv2_3864_CGC19 | CGCFAM_10471 | Yes | 6 | 1 | |
| HRGMv2_3864_CGC23 | CGCFAM_10472 | Yes | 3 | 1 |
Top CAZyme Families