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Cluster: HRGMv2_3864_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3864_1 HRGMv2_3864_1_139 157269 158963 - 3.A.1.120.6
NULL(UNKNOWN) HRGMv2_3864_1 HRGMv2_3864_1_140 158979 161717 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3864_1 HRGMv2_3864_1_141 161729 162292 - Acyltransferase
CAZyme HRGMv2_3864_1 HRGMv2_3864_1_142 162595 163788 + GT2
pfam HRGMv2_3864_1 HRGMv2_3864_1_143 163785 164294 + Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7
NULL(UNKNOWN) HRGMv2_3864_1 HRGMv2_3864_1_144 164546 164635 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3864_1 HRGMv2_3864_1_145 164622 165980 - 3.A.16.1.2
Gene ID: HRGMv2_3864_1_139
Type: TC
Location: 157269 - 158963 (-)
Gene ID: HRGMv2_3864_1_140
Type:
Location: 158979 - 161717 (-)
Gene ID: HRGMv2_3864_1_141
Type: pfam
Location: 161729 - 162292 (-)
Gene ID: HRGMv2_3864_1_142
Type: CAZyme
Location: 162595 - 163788 (+)
Gene ID: HRGMv2_3864_1_143
Type: pfam
Location: 163785 - 164294 (+)
Gene ID: HRGMv2_3864_1_144
Type:
Location: 164546 - 164635 (-)
Gene ID: HRGMv2_3864_1_145
Type: TC
Location: 164622 - 165980 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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