PROTEIN: HRGMv2_3784_10_22
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Protein File & Metadata
Source:
HRGMv2_3784_10_22.pdb
Genome ID:
Protein ID:
HRGMv2_3784_10_22
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Protein Sequence
MATVYSFDLF DTVISRKTGT PKGIFCMMQQ KMQETWPEAA PYFTEHFFDI RIRAEQIARE 60 EANREEISLN IIYQTMQRFY PAIPAGKISR LEMDLERKYS FGIRKTINTI HFLLDLGKRV 120 IFISDMYLPI QQIREMLEKA SPRFTGLPVY LSSEEGVTKL SGDLYRQALG REHLNPSDLL 180 HTGNDPWTDI RIPAELGIHT LLCSETELLP PEQAMLTREN DLYAQLMCGA SRFTRLTAHD 240 NSDVNRTAAT FSGPLFYTCI RPVLARAAEE KNAVVHFMAR DGKVLKTIAD AILSVHPLPV 300 RTNYFYASRE TLIMPSIRDF SERLHSELNR QSFLDHEETL HSLSQKLFLP AEAVQEFLQE 360 KKIRRDKVLK KDECTYFFTW LSRSKYIPQI RQACEKKRHL LLEYLKELKF FSSSNFIVDI 420 GWTGYTQTAL RLMLDTIPVF CWNLLCFGGL PETERLPVKC LTRLSPVDLY KFCTSLELFC 480 QADHGKTIGY ERKDGRIQPL FRSVPPRYLD WPFERYYSGL RSFSRNFTLL LRDFDLDEAE 540 AEPRLRKALL NILKRPPLYI AQSVGSILYT RGVLDGQPKE AAPPFTYKML IRYFLHRNAE 600 ITNWYEGSLA RSNFRLIRLN ASFFQLIRKM TNALIWLKRD GIAATCREAI RQLKTIGKRG 660
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 7 | 623 | 1 | 631 | 0.7017 |
0.753 |
| AF-Q0P8I2-F1-model_v4 | 1 | 633 | 366 | 972 | 0.5915 |
0.7837 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 642 | 430 | 1087 | 0.7157 |
0.922 |
| WAJ24550.1 | GT2 | 1 | 620 | 338 | 968 | 0.6223 |
0.8055 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 653 | 338 | 988 | 0.6211 |
0.7726 |
| AF-U5MZQ8-F1-model_v4 | GT2 | 1 | 615 | 339 | 977 | 0.6109 |
0.8001 |
| U5MZQ8 | GT2 | 1 | 615 | 339 | 977 | 0.6109 |
0.8001 |
| A0A7U7W2D8 | GT4 | 1 | 630 | 366 | 919 | 0.5987 |
0.8635 |
| AF-Q0P8I2-F1-model_v4 | GT4 | 1 | 633 | 366 | 969 | 0.5914 |
0.7869 |
| UKD35065.1 | GT111 | 1 | 650 | 277 | 928 | 0.5767 |
0.694 |
| AF-A0A078BDS9-F1-model_v4 | GT2 | 1 | 628 | 437 | 1015 | 0.5758 |
0.7901 |
| A0A0U3BMS4 | GT111 | 1 | 658 | 307 | 952 | 0.5758 |
0.7044 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 642 | 430 | 1087 | 0.7157 |
0.922 |
| WAJ24550.1 | GT2 | 1 | 620 | 338 | 968 | 0.6223 |
0.8055 |
| U5MZQ8 | GT2 | 1 | 615 | 339 | 977 | 0.6109 |
0.8001 |
| A0A7U7W2D8 | GT4 | 1 | 630 | 366 | 919 | 0.5987 |
0.8635 |
| UKD35065.1 | GT111 | 1 | 650 | 277 | 928 | 0.5767 |
0.694 |
| A0A078BDS9 | GT2 | 1 | 628 | 437 | 1015 | 0.5758 |
0.7901 |
| A0A0U3BMS4 | GT111 | 1 | 658 | 307 | 952 | 0.5758 |
0.7044 |
| A0A975E9I4 | GT2 | 1 | 628 | 426 | 1004 | 0.5689 |
0.7776 |
| AKJ53103.1 | GT8 | 1 | 655 | 312 | 953 | 0.5642 |
0.6932 |
| WII09730.1 | GT111 | 1 | 625 | 394 | 943 | 0.5642 |
0.7875 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a0m-assembly1.cif.gz_B | 2 | 635 | 243 | 873 | 0.646 |
0.8052 |
| 8a0m-assembly2.cif.gz_C | 2 | 635 | 377 | 1021 | 0.6281 |
0.8215 |
| 8a0m-assembly1.cif.gz_A | 2 | 635 | 376 | 1020 | 0.6267 |
0.8195 |
| 8a0c-assembly1.cif.gz_A | 2 | 634 | 381 | 1024 | 0.6255 |
0.8204 |
| 8a0m-assembly2.cif.gz_D | 2 | 632 | 272 | 884 | 0.6239 |
0.8018 |
| 8a0c-assembly1.cif.gz_B | 2 | 633 | 381 | 1022 | 0.6195 |
0.8127 |
| 7shg-assembly1.cif.gz_A | 30 | 581 | 31 | 591 | 0.4872 |
0.5555 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.