PROTEIN: HRGMv2_3772_41_4
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Protein File & Metadata
Source:
HRGMv2_3772_41_4.pdb
Genome ID:
Protein ID:
HRGMv2_3772_41_4
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Protein Sequence
MFEPAEIQLN TYGKPARILF LAPYAPDAPD FSEKPYTGNG GYPRYHYNIY KALQEIGYDV 60 TSSSKPYSVQ CAKGNVDYVF SLMNRFPMAN PEIFISSYCE FIQMPYLGAP PNIRAIAEDK 120 LLTKYVFHSL GLHMPQGIGL SPNKPIPDHE PFPGPYFIKK RFGAASGGIR SDSICETWQA 180 AVSCAERLLA EGHEVLAEQY CPGIDVTVPV LGGKRPVILG FVQPKSDKPG NIITEDLKLH 240 DHLGYQLVPV DNMQEDIIRD INTIWDNLGP MDYFRVDYRI DFESGKRRIL EMNICCHLGK 300 TGSICLAAAQ HGRTQADVLK YILAYSMKRQ SQLPQYGTWL L 341
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9LCT6-F1-model_v4 | 1 | 336 | 5 | 319 | 0.8194 |
0.8739 |
| AF-P44405-F1-model_v4 | 8 | 330 | 1 | 306 | 0.8174 |
0.8779 |
| AF-P07862-F1-model_v4 | 14 | 330 | 1 | 306 | 0.8099 |
0.8698 |
| AF-Q8ZRU1-F1-model_v4 | 14 | 330 | 1 | 306 | 0.8094 |
0.8693 |
| AF-Q32K00-F1-model_v4 | 14 | 330 | 1 | 306 | 0.8084 |
0.8681 |
| AF-A0A0H3GML6-F1-model_v4 | 14 | 330 | 1 | 306 | 0.8081 |
0.868 |
| AF-Q5F6M0-F1-model_v4 | 6 | 334 | 1 | 304 | 0.8068 |
0.8702 |
| AF-Q9HWI0-F1-model_v4 | 5 | 338 | 1 | 346 | 0.7843 |
0.8227 |
| AF-Q2FWH3-F1-model_v4 | 13 | 338 | 1 | 354 | 0.7822 |
0.8507 |
| AF-Q8DNV5-F1-model_v4 | 14 | 338 | 1 | 347 | 0.7783 |
0.841 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7S5R1D6 | GH25 | 7 | 328 | 1 | 265 | 0.642 |
0.7456 |
| A0A7S5UXL7 | GH89 | 16 | 334 | 1 | 267 | 0.6122 |
0.7092 |
| AF-E1R851-F1-model_v4 | GT2 | 10 | 331 | 236 | 555 | 0.542 |
0.7715 |
| AF-A0A193C563-F1-model_v4 | GT2 | 1 | 330 | 318 | 644 | 0.5413 |
0.7771 |
| AF-A0A1H2I7W0-F1-model_v4 | GT2 | 1 | 330 | 314 | 644 | 0.5315 |
0.7566 |
| AF-R4T1S0-F1-model_v4 | GT2 | 1 | 330 | 75 | 644 | 0.5304 |
0.7551 |
| M2QHQ6 | GT2 | 1 | 330 | 315 | 644 | 0.5304 |
0.7551 |
| AF-A0A075UWS8-F1-model_v4 | GT2 | 1 | 330 | 315 | 644 | 0.5297 |
0.7539 |
| AF-A0A2L0EWE4-F1-model_v4 | GT2 , GT25 | 10 | 329 | 759 | 1076 | 0.4483 |
0.7318 |
| AF-A0A517KVN1-F1-model_v4 | PL4_3 | 6 | 333 | 463 | 875 | 0.3816 |
0.5888 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7S5R1D6 | GH25 | 7 | 328 | 1 | 265 | 0.642 |
0.7456 |
| A0A7S5UXL7 | GH89 | 16 | 334 | 1 | 267 | 0.6122 |
0.7092 |
| E1R851 | GT2 | 10 | 331 | 236 | 555 | 0.542 |
0.7715 |
| M2QHQ6 | GT2 | 1 | 330 | 315 | 644 | 0.5304 |
0.7551 |
| A0A7G5J2Y3 | GT69 | 1 | 313 | 7 | 351 | 0.4508 |
0.6702 |
| A0A2L0EWE4 | GT2 , GT25 | 10 | 329 | 759 | 1076 | 0.4483 |
0.7318 |
| A0A517KVN1 | PL4_3 | 6 | 333 | 463 | 875 | 0.3816 |
0.5888 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8evy-assembly1.cif.gz_B | 1 | 333 | 2 | 317 | 0.8086 |
0.8587 |
| 5nri-assembly2.cif.gz_B | 6 | 328 | 1 | 309 | 0.8066 |
0.8642 |
| 1iow-assembly1.cif.gz_A | 14 | 330 | 1 | 306 | 0.8057 |
0.8651 |
| 4c5b-assembly1.cif.gz_A | 14 | 330 | 1 | 306 | 0.8043 |
0.8644 |
| 3r5x-assembly1.cif.gz_B | 15 | 334 | 1 | 291 | 0.8038 |
0.883 |
| 3r5x-assembly2.cif.gz_C | 14 | 336 | 1 | 284 | 0.7993 |
0.8885 |
| 8evx-assembly1.cif.gz_B | 9 | 330 | 1 | 305 | 0.7981 |
0.8585 |
| 3r23-assembly1.cif.gz_A | 15 | 334 | 1 | 304 | 0.7941 |
0.8566 |
| 5d8d-assembly3.cif.gz_D | 6 | 331 | 1 | 284 | 0.794 |
0.8823 |
| 3r23-assembly1.cif.gz_B | 14 | 334 | 1 | 300 | 0.793 |
0.8601 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C4XRH9-F1-model_v4 | 16 | 334 | 1 | 304 | 0.8356 |
0.8989 |
| AF-Q316H9-F1-model_v4 | 16 | 337 | 1 | 308 | 0.8301 |
0.8888 |
| AF-A7FPH8-F1-model_v4 | 16 | 333 | 1 | 300 | 0.8299 |
0.8977 |
| AF-B1KV16-F1-model_v4 | 16 | 333 | 1 | 300 | 0.8287 |
0.8966 |
| AF-A4XQS6-F1-model_v4 | 1 | 331 | 1 | 313 | 0.8286 |
0.8806 |
| AF-B3R6V7-F1-model_v4 | 1 | 340 | 2 | 327 | 0.8284 |
0.8668 |
| AF-A4VII0-F1-model_v4 | 1 | 332 | 1 | 314 | 0.8284 |
0.879 |
| AF-A1VGU5-F1-model_v4 | 16 | 332 | 1 | 303 | 0.8282 |
0.8927 |
| AF-C1FSC4-F1-model_v4 | 16 | 333 | 1 | 300 | 0.8281 |
0.8961 |
| AF-Q0K6M6-F1-model_v4 | 1 | 340 | 2 | 327 | 0.828 |
0.8664 |