dbCAN Logo

PROTEIN: HRGMv2_3772_25_29

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_3772_25_29.pdb
Genome ID:
HRGMv2_3772
Protein ID:
HRGMv2_3772_25_29

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MFSTPSMSVP   QNTIALVFDY   DQTLSPHYMQ   DEAIFPEFGI   SAREFWKNCN   EFVSREQWDG 60
ELGYLKALLD   ALSLDQVSNA   MLENLGQRLT   FYPGLPDFFK   WLPEVALTEK   HREMGIKLEY 120
YIISSGLKAL   IDGAAIRPYF   KAVFGCEFSE   SNGAIDFPKR   VISHTTKTQF   LFRINKGLLD 180
YSQDVNDHMA   EDMRPVPFRN   MIYVGDGPTD   VPCFTVMRHN   GGHAIAVYNP   DDESGLSFRK 240
CYNLSSSSDR   VNFMAPADYR   PDSHLSRILG   ALVSDIADGI   VRRRTREQED   ARGTSIQF 298
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O25367-F1-model_v4 12 270 1 207 0.6961 0.8414
AF-Q9I4P0-F1-model_v4 12 272 1 200 0.677 0.8275
AF-Q58989-F1-model_v4 10 271 2 211 0.6763 0.8155
AF-I1MCY1-F1-model_v4 10 296 1 257 0.6713 0.7586
AF-K0F6P7-F1-model_v4 13 257 1 211 0.6697 0.8022
AF-Q9I4J2-F1-model_v4 13 258 1 217 0.6647 0.7883
AF-B4F825-F1-model_v4 11 294 1 261 0.6626 0.7592
AF-Q0PAE6-F1-model_v4 13 257 1 212 0.6578 0.7872
AF-Q9I6F6-F1-model_v4 13 258 1 217 0.6516 0.773
AF-Q67YC0-F1-model_v4 9 298 9 276 0.6511 0.7402
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A4Q7MKR4 GT81 1 274 224 459 0.5217 0.7943
AF-A0A5B8V929-F1-model_v4 GT81 1 273 115 458 0.5206 0.6928
AF-A0A3B7MPW8-F1-model_v4 GT81 1 273 223 458 0.5178 0.7877
AF-A0A7D5XLJ8-F1-model_v4 GT81 8 270 236 455 0.5113 0.8279
AF-A0A344TQ89-F1-model_v4 GT81 2 273 228 458 0.5077 0.7866
AF-A0A6H2BQU9-F1-model_v4 GT81 1 285 223 460 0.5065 0.7884
AF-A0A291QSR3-F1-model_v4 GT81 1 281 232 475 0.5023 0.7741
BCS37102.1 GT81 10 284 244 475 0.4956 0.7878
AF-A0A345D7W5-F1-model_v4 GT81 9 282 291 517 0.4914 0.8091
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A4Q7MKR4 GT81 1 274 224 459 0.5217 0.7943
A0A7D5XLJ8 GT81 8 270 236 455 0.5113 0.8279
BCS37102.1 GT81 10 284 244 475 0.4956 0.7878
A0A345D7W5 GT81 9 282 291 517 0.4914 0.8091
A0A3N4Q3V3 GT81 5 280 234 459 0.485 0.7959
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3m1y-assembly1.cif.gz_B 13 270 1 206 0.6992 0.8462
3m1y-assembly2.cif.gz_D 11 268 1 206 0.6955 0.8418
3m1y-assembly2.cif.gz_C 11 271 1 208 0.6943 0.8376
1l7n-assembly1.cif.gz_A 11 273 1 209 0.6734 0.8107
1l7p-assembly2.cif.gz_B 10 274 1 210 0.6701 0.8061
4eze-assembly1.cif.gz_A 11 278 80 291 0.6042 0.8394
4eze-assembly2.cif.gz_B 11 277 78 288 0.6026 0.8374
7qpl-assembly1.cif.gz_A 13 272 80 289 0.5703 0.8014
3n28-assembly1.cif.gz_A 11 279 103 320 0.5701 0.8076
5jlp-assembly1.cif.gz_A 12 272 176 385 0.5149 0.8208
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O51040-F1-model_v4 7 277 1 285 0.8269 0.8997
AF-Q7M7U5-F1-model_v4 13 270 1 206 0.6986 0.8456
AF-B0R7U7-F1-model_v4 13 277 1 211 0.6866 0.8242
AF-Q5QXU4-F1-model_v4 10 278 2 217 0.6856 0.8236
AF-Q9CHW3-F1-model_v4 10 279 1 216 0.6827 0.8132
AF-Q5M3B3-F1-model_v4 10 278 2 215 0.6787 0.8128
AF-Q58989-F1-model_v4 10 271 2 211 0.6763 0.8155
AF-Q67YC0-F1-model_v4 9 298 9 276 0.6511 0.7402
AF-Q12A06-F1-model_v4 12 271 23 236 0.6456 0.8082
AF-Q21YU0-F1-model_v4 12 274 23 237 0.6409 0.8011
Download Full SwissProt Results