PROTEIN: HRGMv2_3651_2_129
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Protein File & Metadata
Source:
HRGMv2_3651_2_129.pdb
Genome ID:
Protein ID:
HRGMv2_3651_2_129
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Protein Sequence
MGLTMKERAS VTKETAKRYK DAGKKEKQII LNEYVKLTGF ARKYAISKLN GCIKRQEHIF 60 NNVVIKSARI ENPKRKKREY IPKYGKDVLN SLTKIWRTFD FMCGQRLIPF IRENLDTLYV 120 EPLFEITPPV YEKLGTLSSA TANRLLKSER QKNKIHGTST TKAGGNLNKL IPVRAYFDWD 180 ERVPGFFEMD TVARDGGTAR GEYCFTLDFT DVCTGWTVLY ALLNKAHRWV KESSEDLKKN 240 LPYPLKGLDS DNGSEFKNYQ MVKWCGENKV TFTRSRSYKK DDNCFVEQKN YSVVRHLVGY 300 YRYEGEAAKI ALQNLYDKWN LLVNYFYPSV KILAKERKNA HTYKKYDSAK TPYRRCLESD 360 KISDEVKSKL QEIKTKLNVV QLKKQVEENL KIVLQLSKKW N 401
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71644-F1-model_v4 | 77 | 401 | 32 | 365 | 0.7174 |
0.871 |
| AF-A0A0H3H5K8-F1-model_v4 | 1 | 380 | 7 | 326 | 0.653 |
0.7496 |
| AF-P0CF58-F1-model_v4 | 5 | 364 | 1 | 293 | 0.6414 |
0.7666 |
| AF-P0CF54-F1-model_v4 | 5 | 364 | 1 | 293 | 0.6371 |
0.7626 |
| AF-P0CF57-F1-model_v4 | 4 | 364 | 1 | 293 | 0.6361 |
0.7609 |
| AF-P0CF56-F1-model_v4 | 5 | 364 | 1 | 293 | 0.6352 |
0.7599 |
| AF-Q9I4Y2-F1-model_v4 | 10 | 365 | 5 | 266 | 0.6274 |
0.7973 |
| AF-Q9I6N2-F1-model_v4 | 73 | 362 | 1 | 263 | 0.6148 |
0.7544 |
| AF-Q32GU7-F1-model_v4 | 48 | 364 | 14 | 270 | 0.6145 |
0.7815 |
| AF-Q327S0-F1-model_v4 | 44 | 364 | 11 | 271 | 0.6116 |
0.7788 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B2A4C4 | GH36 | 3 | 368 | 1 | 309 | 0.6177 |
0.7162 |
| J3J8L1 | GT2 | 78 | 365 | 19 | 278 | 0.5826 |
0.7455 |
| UVC14533.1 | GT4 | 1 | 388 | 10 | 329 | 0.4541 |
0.6824 |
| A5AWY8 | GT1 | 1 | 401 | 622 | 1114 | 0.3825 |
0.5899 |
| P12497 | GH34 | 1 | 364 | 640 | 1356 | 0.3186 |
0.5434 |
| A0A4Y1QZY6 | CE8 | 79 | 401 | 511 | 957 | 0.3036 |
0.57 |
| A5B9Y9 | GH38 | 4 | 401 | 847 | 1868 | 0.2969 |
0.5109 |
| A0A8H8J0E5 | AA1_1 | 84 | 397 | 563 | 847 | 0.2924 |
0.6608 |
| A0A6V7PE18 | GT1 | 78 | 401 | 238 | 2258 | 0.2892 |
0.5963 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B2A4C4 | GH36 | 3 | 368 | 1 | 309 | 0.6177 |
0.7162 |
| J3J8L1 | GT2 | 78 | 365 | 19 | 278 | 0.5826 |
0.7455 |
| UVC14533.1 | GT4 | 1 | 388 | 10 | 329 | 0.4541 |
0.6824 |
| A5AWY8 | GT1 | 1 | 401 | 622 | 1114 | 0.3825 |
0.5899 |
| P12497 | GH34 | 1 | 364 | 640 | 1356 | 0.3186 |
0.5434 |
| A0A4Y1QZY6 | CE8 | 79 | 401 | 511 | 957 | 0.3036 |
0.57 |
| A5B9Y9 | GH38 | 4 | 401 | 847 | 1868 | 0.2969 |
0.5109 |
| A0A8H8J0E5 | AA1_1 | 84 | 397 | 563 | 847 | 0.2924 |
0.6608 |
| A0A6V7PE18 | GT1 | 78 | 401 | 238 | 2258 | 0.2892 |
0.5963 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37247-F1-model_v4 | 4 | 365 | 5 | 322 | 0.6587 |
0.7587 |
| AF-P0CF58-F1-model_v4 | 5 | 364 | 1 | 293 | 0.6414 |
0.7666 |
| AF-P0C5W5-F1-model_v4 | 5 | 364 | 1 | 293 | 0.64 |
0.7654 |
| AF-P0CF61-F1-model_v4 | 4 | 364 | 6 | 299 | 0.6387 |
0.7684 |
| AF-P0CF59-F1-model_v4 | 4 | 364 | 1 | 293 | 0.6383 |
0.7637 |
| AF-P0CF54-F1-model_v4 | 5 | 364 | 1 | 293 | 0.6371 |
0.7626 |
| AF-P24577-F1-model_v4 | 6 | 365 | 4 | 269 | 0.6369 |
0.7947 |
| AF-P0CF64-F1-model_v4 | 4 | 364 | 6 | 299 | 0.6368 |
0.7666 |
| AF-P0CF57-F1-model_v4 | 4 | 364 | 1 | 293 | 0.6361 |
0.7609 |
| AF-P0CF56-F1-model_v4 | 5 | 364 | 1 | 293 | 0.6352 |
0.7599 |