PROTEIN: HRGMv2_3504_5_80
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Protein File & Metadata
Source:
HRGMv2_3504_5_80.pdb
Genome ID:
Protein ID:
HRGMv2_3504_5_80
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Protein Sequence
MNVNDFKKRT AIVILAYADF ESLELALATH AKFSTTSGVD IYILQNGRST YDCERTYEVA 60 KRYQQLFPKQ IKVIDNIPPG IPYFSLKALF DSSLFERYDY IIKLDDDVLV LTPDWTDKLC 120 ETYINNFNIY GDKLAYVTSL VNNNPYGFKK IIEYSPELSE EYFSTIAREH FVGCSINNNF 180 APYRIIEKNR IVAGSNGTIW GTPGLVRWLH KKTTLVPDRY IEFAQTLQPE FVNNKERYSI 240 NCMLFAKRFW NSIGNGENDD EHMVHHYCLK HNLFICSNLQ IPMIHLAFFI QRNEVRELMD 300 SIRNTYRDFL KLPFNLEICA NRLIEIENRL RFIEKKVDIL IPPLTRQDLP ASTDDSVAFK 360 VYRYDQMMSV VNKILPERTK RRYFIKSILK SVYKKIFSKS 400
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C0NWW0-F1-model_v4 | 2 | 320 | 75 | 425 | 0.5956 |
0.7716 |
| AF-C0NZA9-F1-model_v4 | 2 | 315 | 67 | 410 | 0.5917 |
0.7746 |
| AF-C1H7H9-F1-model_v4 | 1 | 317 | 81 | 435 | 0.5872 |
0.7713 |
| AF-C1HDV8-F1-model_v4 | 1 | 315 | 70 | 412 | 0.5816 |
0.7714 |
| AF-A0A133CI93-F1-model_v4 | 1 | 376 | 1 | 245 | 0.5697 |
0.7498 |
| AF-C1HAE4-F1-model_v4 | 2 | 314 | 81 | 460 | 0.5671 |
0.7782 |
| AF-A0A1C1CRS5-F1-model_v4 | 2 | 314 | 113 | 461 | 0.5659 |
0.7742 |
| AF-A0A0D2HMZ8-F1-model_v4 | 1 | 292 | 113 | 400 | 0.4566 |
0.632 |
| AF-Q9LF09-F1-model_v4 | 1 | 381 | 1 | 395 | 0.4513 |
0.5081 |
| AF-A0A044SGH9-F1-model_v4 | 1 | 302 | 2 | 248 | 0.4503 |
0.7368 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QRF24375.1 | GT2 | 1 | 376 | 1 | 249 | 0.5437 |
0.7494 |
| AF-A0A4D6U793-F1-model_v4 | GT2 | 4 | 378 | 1 | 253 | 0.5431 |
0.7043 |
| QZO08129.1 | GT2 | 4 | 379 | 2 | 253 | 0.5402 |
0.7322 |
| AF-A0A2H4VQD5-F1-model_v4 | GT2 | 8 | 387 | 1 | 297 | 0.5397 |
0.6321 |
| AF-A0A2H4VCM0-F1-model_v4 | GT2 | 8 | 387 | 1 | 297 | 0.5397 |
0.6321 |
| AF-A0A2H4VGG5-F1-model_v4 | GT2 | 8 | 387 | 1 | 297 | 0.5395 |
0.6319 |
| AF-Q144H0-F1-model_v4 | GT2 | 1 | 379 | 1 | 283 | 0.5379 |
0.6631 |
| AF-F0TBS0-F1-model_v4 | GT2 | 8 | 380 | 1 | 290 | 0.5374 |
0.6385 |
| AF-A0A248VDE3-F1-model_v4 | GT2 | 1 | 379 | 1 | 283 | 0.5368 |
0.6618 |
| A0A554XE23 | GT2 | 12 | 292 | 1 | 225 | 0.5364 |
0.8232 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6J5QBF3 | GT2 | 2 | 320 | 8 | 276 | 0.5831 |
0.7203 |
| A0A9J7AI57 | GT2 | 6 | 378 | 1 | 255 | 0.5628 |
0.7285 |
| QZP00411.1 | GT2 | 5 | 379 | 1 | 253 | 0.5531 |
0.7108 |
| BCX67105.1 | GT2 | 5 | 379 | 1 | 245 | 0.5525 |
0.7348 |
| A0A2N5YF65 | GT2 | 8 | 378 | 1 | 256 | 0.5519 |
0.7125 |
| UKL13923.1 | GT2 | 1 | 378 | 12 | 270 | 0.5495 |
0.7187 |
| A0A0N9WBP7 | GT2 | 5 | 314 | 6 | 268 | 0.5493 |
0.7025 |
| A0A1H2HWJ4 | GT2 | 2 | 378 | 2 | 264 | 0.5439 |
0.7132 |
| QRF24375.1 | GT2 | 1 | 376 | 1 | 249 | 0.5437 |
0.7494 |
| A0A4D6U793 | GT2 | 4 | 378 | 1 | 253 | 0.5431 |
0.7043 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3zf8-assembly1.cif.gz_A-2 | 1 | 299 | 13 | 288 | 0.5351 |
0.6601 |
| 6fxm-assembly1.cif.gz_A-2 | 1 | 330 | 240 | 538 | 0.3959 |
0.6457 |
| 6fxk-assembly1.cif.gz_A-2 | 4 | 330 | 239 | 534 | 0.3947 |
0.6461 |
| 6te3-assembly1.cif.gz_A | 4 | 330 | 241 | 536 | 0.3919 |
0.6478 |
| 6tex-assembly1.cif.gz_A | 3 | 330 | 254 | 550 | 0.3899 |
0.647 |
| 6fxr-assembly1.cif.gz_A | 4 | 330 | 255 | 550 | 0.3892 |
0.6475 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B5ZWP0-F1-model_v4 | 2 | 312 | 1 | 251 | 0.564 |
0.705 |
| AF-Q1MN23-F1-model_v4 | 2 | 311 | 1 | 251 | 0.5638 |
0.7055 |
| AF-A7IIM9-F1-model_v4 | 1 | 313 | 2 | 254 | 0.5606 |
0.7019 |
| AF-P9WMY2-F1-model_v4 | 5 | 384 | 1 | 297 | 0.5145 |
0.6127 |
| AF-B0CM52-F1-model_v4 | 8 | 382 | 1 | 406 | 0.463 |
0.518 |
| AF-P52417-F1-model_v4 | 2 | 385 | 73 | 489 | 0.4567 |
0.5431 |
| AF-Q9LF09-F1-model_v4 | 1 | 381 | 1 | 395 | 0.4513 |
0.5081 |
| AF-Q8T1C6-F1-model_v4 | 4 | 378 | 1 | 263 | 0.4463 |
0.6778 |
| AF-O45293-F1-model_v4 | 2 | 378 | 102 | 349 | 0.4434 |
0.7129 |
| AF-Q9LZR3-F1-model_v4 | 1 | 381 | 84 | 480 | 0.4231 |
0.5128 |