PROTEIN: HRGMv2_3372_3_96
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Protein File & Metadata
Source:
HRGMv2_3372_3_96.pdb
Genome ID:
Protein ID:
HRGMv2_3372_3_96
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Protein Sequence
MKKKLVKEDK KIKFYDILFL ISLGIILILT VISVVFFKKT INYYENRSSY YFSAPTIENI 60 KSGEFQKSFE LALSDQILMS SRVKKIYNFF NNYVNILFSN FVFKTYCNDN YIKTTPNSIT 120 FGCDNNLVYE PIYITNDNKS LFDNRISNIN NLINKSPVPV YTYYIEKDTD INFKNNEKTN 180 VSGYIYKNIL DKSNFNVFHI NNFSEFQNYF YKTDHHWNYM GSYEAYKDLA NTLNLGEVIK 240 SSVIKCNNSK FSGSKASIAG SSYIYKEDFC AYVFDFPEHI TYINGEKVND YGSQNNFEMN 300 NISYGMYYGG DDAEIIFDYN NPTKENILII GESYDNAILK LISTHYNKTF SIDLRHYERQ 360 FGEKFNYLEY IKKNNINKTL LIGNIDFYRS QDFDMEV 397
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q51393-F1-model_v4 | 15 | 397 | 22 | 375 | 0.5613 |
0.6383 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1U9R721-F1-model_v4 | GT2 | 24 | 397 | 12 | 765 | 0.4223 |
0.6012 |
| USZ49714.1 | GT0 | 21 | 397 | 105 | 750 | 0.4163 |
0.5877 |
| AF-A0A5K7Y5Q0-F1-model_v4 | GT0 | 50 | 397 | 410 | 711 | 0.416 |
0.7031 |
| AF-A0A5P9INU8-F1-model_v4 | GT0 | 53 | 397 | 413 | 714 | 0.4155 |
0.7055 |
| AF-A0A386X1Z0-F1-model_v4 | GT0 | 2 | 397 | 10 | 731 | 0.4129 |
0.553 |
| AF-A0A2R4XP73-F1-model_v4 | GT0 | 93 | 397 | 134 | 735 | 0.4116 |
0.6982 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1U9R721 | GT2 | 24 | 397 | 12 | 765 | 0.4223 |
0.6012 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5v8e-assembly2.cif.gz_B | 47 | 396 | 1 | 305 | 0.6946 |
0.7977 |
| 5v8d-assembly3.cif.gz_C | 113 | 397 | 1 | 299 | 0.6942 |
0.8407 |
| 5v8d-assembly2.cif.gz_B | 110 | 397 | 1 | 297 | 0.6941 |
0.8295 |
| 5v8d-assembly4.cif.gz_D | 113 | 397 | 1 | 300 | 0.6931 |
0.8409 |
| 4nzk-assembly1.cif.gz_A | 107 | 397 | 1 | 302 | 0.6917 |
0.8282 |
| 5v8d-assembly1.cif.gz_A | 117 | 397 | 1 | 289 | 0.6877 |
0.8286 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q887Q7-F1-model_v4 | 5 | 397 | 2 | 366 | 0.5821 |
0.6446 |
| AF-P59792-F1-model_v4 | 10 | 397 | 11 | 365 | 0.5626 |
0.6394 |