Genome Details
Selected Rep_genome_ID: HRGMv2_3372
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS872
Species
UMGS872 sp900546275
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR002254 | 1,107,430 | 91.57% | 0% | China | Asia | CGMR |
| HRGMv2_3372 | 1,311,392 | 92.69% | 0% | UK | Europe | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_J_22_1662.267 | 1,041,630 | 91.57% | 0% | NA | Africa | Hadza |
| Rep_1587 | 1,132,371 | 91.573% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3372_CGC3 | CGCFAM_00040 | Yes | 7 | 4 | |
| HRGMv2_3372_CGC6 | CGCFAM_00516 | Yes | 3 | 1 | |
| HRGMv2_3372_CGC4 | CGCFAM_00694 | Yes | 4 | 1 | |
| HRGMv2_3372_CGC5 | CGCFAM_02180 | Yes | 3 | 1 | |
| HRGMv2_3372_CGC7 | CGCFAM_02215 | Yes | 4 | 1 | |
| HRGMv2_3372_CGC8 | CGCFAM_02367 | Yes | 3 | 1 |
Top CAZyme Families