Cluster: HRGMv2_3372_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3372
- CGC Family ID: CGCFAM_00694
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3372_4 | HRGMv2_3372_4_34 | 35065 | 36516 | + | 9.A.11.1.2 |
| pfam | HRGMv2_3372_4 | HRGMv2_3372_4_35 | 36506 | 37690 | + | Spore_GerAC |
| pfam | HRGMv2_3372_4 | HRGMv2_3372_4_36 | 37677 | 38753 | + | Spore_permease |
| CAZyme | HRGMv2_3372_4 | HRGMv2_3372_4_37 | 38799 | 39740 | + | GT2 |
Gene ID: HRGMv2_3372_4_34
Type: TC
Location: 35065 - 36516 (+)
Type: TC
Location: 35065 - 36516 (+)
Gene ID: HRGMv2_3372_4_35
Type: pfam
Location: 36506 - 37690 (+)
Type: pfam
Location: 36506 - 37690 (+)
Gene ID: HRGMv2_3372_4_36
Type: pfam
Location: 37677 - 38753 (+)
Type: pfam
Location: 37677 - 38753 (+)
Gene ID: HRGMv2_3372_4_37
Type: CAZyme
Location: 38799 - 39740 (+)
Type: CAZyme
Location: 38799 - 39740 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS872
Species
UMGS872 sp900546275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.