PROTEIN: HRGMv2_3372_15_10
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Protein File & Metadata
Source:
HRGMv2_3372_15_10.pdb
Genome ID:
Protein ID:
HRGMv2_3372_15_10
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Protein Sequence
MDSYSKALEK IKYDQKCKPS CCVGPTGPRG MMGPIGKTGP TGPIGPIGPT GPAGTSLLRT 60 AYLVTYNDGT HQNGRPIVSE ARLPIDRNEL DPTSLITLDT ENETISFNVI GHYKISVIVS 120 VYSLKTDTQF NPATDFVSIG FRTVGTDNIY VGASEWSYDE KAKQLYMHGM ISVPDTSELY 180 ELVNIGSQTI YLATPDLKNI KSKSYFTNSL VTIIIEYLGK QRE 223
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B8JLI7-F1-model_v4 | 50 | 220 | 46 | 208 | 0.5832 |
0.7779 |
| AF-E7F5I8-F1-model_v4 | 45 | 223 | 51 | 211 | 0.5641 |
0.7664 |
| AF-A0A2R8QR93-F1-model_v4 | 11 | 221 | 17 | 194 | 0.5547 |
0.6641 |
| AF-Q1L944-F1-model_v4 | 47 | 221 | 43 | 190 | 0.5446 |
0.7597 |
| AF-Q9R171-F1-model_v4 | 48 | 221 | 44 | 193 | 0.5374 |
0.745 |
| AF-P63182-F1-model_v4 | 48 | 221 | 44 | 193 | 0.5367 |
0.7445 |
| AF-A5PKT3-F1-model_v4 | 47 | 221 | 54 | 201 | 0.5345 |
0.7626 |
| AF-A0A0A0MPI6-F1-model_v4 | 45 | 221 | 68 | 211 | 0.5322 |
0.797 |
| AF-F1RDY1-F1-model_v4 | 46 | 221 | 54 | 200 | 0.531 |
0.7572 |
| AF-D3Z9H1-F1-model_v4 | 51 | 221 | 44 | 197 | 0.5309 |
0.7272 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3tyj-assembly1.cif.gz_A | 54 | 219 | 1 | 136 | 0.6928 |
0.8803 |
| 2r6q-assembly1.cif.gz_A | 54 | 219 | 3 | 138 | 0.688 |
0.881 |
| 7x9g-assembly1.cif.gz_B | 57 | 222 | 1 | 143 | 0.6845 |
0.8542 |
| 1rj8-assembly2.cif.gz_G | 58 | 222 | 1 | 140 | 0.6727 |
0.8473 |
| 4ht1-assembly1.cif.gz_T | 57 | 219 | 1 | 131 | 0.6625 |
0.857 |
| 4ous-assembly1.cif.gz_A | 57 | 221 | 1 | 132 | 0.6493 |
0.8402 |
| 4oum-assembly1.cif.gz_A | 57 | 221 | 1 | 132 | 0.6471 |
0.8377 |
| 4oul-assembly2.cif.gz_E | 57 | 221 | 1 | 130 | 0.6451 |
0.8408 |
| 1pk6-assembly1.cif.gz_C | 57 | 221 | 2 | 129 | 0.6442 |
0.8464 |
| 4qqp-assembly1.cif.gz_A | 57 | 221 | 1 | 130 | 0.642 |
0.8365 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9R171-F1-model_v4 | 48 | 221 | 44 | 193 | 0.5374 |
0.745 |
| AF-P63182-F1-model_v4 | 48 | 221 | 44 | 193 | 0.5367 |
0.7445 |
| AF-P86437-F1-model_v4 | 49 | 221 | 44 | 193 | 0.5367 |
0.7435 |
| AF-Q8BME9-F1-model_v4 | 1 | 221 | 23 | 198 | 0.5322 |
0.6478 |
| AF-Q9JHG0-F1-model_v4 | 48 | 221 | 47 | 197 | 0.5307 |
0.7369 |
| AF-Q3Y5Z3-F1-model_v4 | 42 | 223 | 90 | 240 | 0.5264 |
0.7982 |
| AF-O43508-F1-model_v4 | 46 | 219 | 94 | 249 | 0.5256 |
0.7886 |
| AF-O54907-F1-model_v4 | 49 | 219 | 97 | 249 | 0.5232 |
0.7994 |
| AF-Q17QF9-F1-model_v4 | 52 | 221 | 51 | 205 | 0.5222 |
0.7239 |
| AF-Q6UW01-F1-model_v4 | 52 | 221 | 51 | 205 | 0.5215 |
0.721 |