PROTEIN: HRGMv2_3309_2_43
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Protein File & Metadata
Source:
HRGMv2_3309_2_43.pdb
Genome ID:
Protein ID:
HRGMv2_3309_2_43
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Protein Sequence
MNSGGTGDLY EKYADAVYLP SKVRLESCTL CQLKCKCCYM RNDVNTVGIG YLRFADFMRF 60 VDRHPYVKEI EISNSGEIFL NKDLPAIMEY AFHKRVALTA WSGANFNNVS DEALDALVRF 120 RFKGLTLSID GATQAAYEKY RVGGCLDRVF ENVRKLNELK RKYNSPYPKL SWQFIIFGHN 180 EREIPLVKKM APELGFSNVF FKLNYDGNFS PVEDVEFVKR ETGLKYVSRA EYLEHEGKSY 240 SRSMCMALWK APAINWDGRL LGCCNMYKDD FGVNVFECGL EKALGSRRFR EAQKMLLNFG 300 PETDNPCVNC QRYKIMKETK SYLTLEEIEE YKK 333
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GNP7-F1-model_v4 | 7 | 321 | 3 | 340 | 0.6934 |
0.796 |
| AF-Q9I2C0-F1-model_v4 | 9 | 321 | 8 | 344 | 0.6893 |
0.7968 |
| AF-Q0P810-F1-model_v4 | 17 | 327 | 20 | 303 | 0.6651 |
0.7595 |
| AF-P9WJ79-F1-model_v4 | 1 | 320 | 1 | 338 | 0.6486 |
0.7452 |
| AF-Q58317-F1-model_v4 | 19 | 316 | 4 | 282 | 0.6449 |
0.7303 |
| AF-K0EX36-F1-model_v4 | 11 | 319 | 8 | 330 | 0.6412 |
0.7174 |
| AF-Q9I3K7-F1-model_v4 | 12 | 318 | 7 | 318 | 0.6356 |
0.7043 |
| AF-Q2FX16-F1-model_v4 | 8 | 327 | 21 | 373 | 0.6197 |
0.7054 |
| AF-G3XD10-F1-model_v4 | 8 | 321 | 20 | 370 | 0.6193 |
0.7197 |
| AF-Q8ZRZ6-F1-model_v4 | 8 | 321 | 1 | 358 | 0.6173 |
0.7241 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A059PCT3-F1-model_v4 | GT4 | 17 | 327 | 197 | 535 | 0.5942 |
0.7897 |
| AF-B8FKA9-F1-model_v4 | GT2 | 1 | 330 | 387 | 720 | 0.5482 |
0.7628 |
| A0A5F1B7M3 | GT4 | 1 | 327 | 11 | 773 | 0.5453 |
0.781 |
| AF-A0A7L4ZGC0-F1-model_v4 | GT4 | 1 | 331 | 30 | 767 | 0.5432 |
0.7673 |
| AF-A0A3T0GHT3-F1-model_v4 | GT4 | 1 | 327 | 20 | 774 | 0.5418 |
0.7755 |
| AF-L0R7P7-F1-model_v4 | GT4 | 1 | 327 | 83 | 769 | 0.5416 |
0.7757 |
| AF-A0A4Y6USF7-F1-model_v4 | GT4 | 1 | 327 | 346 | 773 | 0.5397 |
0.7732 |
| AF-A0A7G8WE67-F1-model_v4 | GT4 | 1 | 331 | 85 | 767 | 0.5395 |
0.7621 |
| AF-A0A7G5XLX4-F1-model_v4 | GT4 | 1 | 327 | 82 | 763 | 0.5395 |
0.7697 |
| AF-A0A6I6CJQ6-F1-model_v4 | GT4 | 1 | 327 | 399 | 773 | 0.5391 |
0.7725 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B8FKA9 | GT2 | 1 | 330 | 387 | 720 | 0.5482 |
0.7628 |
| A0A5F1B7M3 | GT4 | 1 | 327 | 11 | 773 | 0.5453 |
0.781 |
| A0A7L4ZGC0 | GT4 | 1 | 331 | 30 | 767 | 0.5432 |
0.7673 |
| A0A212KIT7 | GT2 | 1 | 321 | 265 | 773 | 0.5345 |
0.778 |
| BCO29850.1 | GT4 | 1 | 327 | 1 | 779 | 0.5256 |
0.7551 |
| UJR22630.1 | GT4 | 9 | 332 | 485 | 842 | 0.5163 |
0.7639 |
| QLA18380.1 | GT2 | 1 | 333 | 513 | 860 | 0.5007 |
0.7261 |
| A0A4U1HLS2 | GH13 | 6 | 333 | 585 | 930 | 0.4977 |
0.7495 |
| APR80497.1 | GH13 | 6 | 330 | 653 | 993 | 0.4947 |
0.7623 |
| L1QBB5 | GT4 | 1 | 332 | 114 | 729 | 0.4916 |
0.7039 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7voc-assembly1.cif.gz_C | 18 | 333 | 1 | 327 | 0.6863 |
0.7393 |
| 4m7t-assembly1.cif.gz_A | 16 | 333 | 1 | 242 | 0.6754 |
0.8061 |
| 6q2q-assembly1.cif.gz_A | 18 | 333 | 1 | 279 | 0.6527 |
0.7442 |
| 6efn-assembly1.cif.gz_A-2 | 8 | 329 | 7 | 379 | 0.6451 |
0.7275 |
| 4k38-assembly2.cif.gz_B | 19 | 321 | 1 | 339 | 0.6374 |
0.742 |
| 4k36-assembly2.cif.gz_B | 19 | 321 | 1 | 340 | 0.6356 |
0.7414 |
| 4k37-assembly1.cif.gz_A | 20 | 321 | 1 | 340 | 0.6352 |
0.7427 |
| 4k37-assembly2.cif.gz_B | 20 | 321 | 1 | 344 | 0.6347 |
0.7455 |
| 5v1s-assembly1.cif.gz_A | 4 | 321 | 14 | 421 | 0.6343 |
0.7551 |
| 4k36-assembly1.cif.gz_A | 19 | 333 | 1 | 378 | 0.6314 |
0.7244 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q51741-F1-model_v4 | 20 | 333 | 1 | 355 | 0.7179 |
0.8007 |
| AF-P59749-F1-model_v4 | 6 | 321 | 1 | 335 | 0.7095 |
0.7967 |
| AF-Q9L3B0-F1-model_v4 | 11 | 321 | 1 | 332 | 0.7088 |
0.8015 |
| AF-Q0BQS8-F1-model_v4 | 10 | 321 | 1 | 334 | 0.6976 |
0.8012 |
| AF-B8ENI9-F1-model_v4 | 7 | 321 | 1 | 337 | 0.6974 |
0.7936 |
| AF-Q608P0-F1-model_v4 | 9 | 321 | 4 | 338 | 0.6965 |
0.7981 |
| AF-Q3BQI4-F1-model_v4 | 14 | 322 | 1 | 334 | 0.696 |
0.8051 |
| AF-Q01060-F1-model_v4 | 7 | 321 | 3 | 340 | 0.6953 |
0.7955 |
| AF-Q2P4Y9-F1-model_v4 | 11 | 321 | 1 | 334 | 0.6952 |
0.7992 |
| AF-B2SSW3-F1-model_v4 | 11 | 322 | 1 | 334 | 0.6948 |
0.7969 |