PROTEIN: HRGMv2_3194_1_163
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Protein File & Metadata
Source:
HRGMv2_3194_1_163.pdb
Genome ID:
Protein ID:
HRGMv2_3194_1_163
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Protein Sequence
MRTKRTLINL VYTLGQSLVL LLLGLVTRKL FVTNFDAFVP GYSDTINNIF NFFSIAEFGV 60 GSVISYRLYE QIAAKDIDRI SRYMSLYKWA YRAIGAFIAL MAVICAFFLP LLVVQEQEPD 120 WLMVYGIYAM TALSTLSSYF LVTRRLMYTC TQQGYVCTKI DLGFNVATSL AKIAIALWIP 180 NYFLYFGIQI LFNTLANVVV ARRYRKDFPE LYDVKVSLSD FKDLGIFHDL RYYLVHKLSN 240 TIYGSSDNIV ITSMRGAALV TQTGNYSTIS TSVNNICNKI LDSFAAAIGS IVYDRDAEAD 300 GHAKAVFWGL DLFSYCFGSF VAVAYFCLFQ PFIRLWMGES YLLPMAYVFW FCMNEYIGWN 360 HRMLGSYRAV LGHFEEDQWF MVASAASNVV LSFALVIPFG LAGVVGATVF AHCLMWIGRA 420 RVVCRHYMKG CGWRYLGLQL LHWVTLFAIM FLTARLCELC GQGFLAFVGK VCIVAVVPNL 480 CNLAIYGWTS DAAYLRGRGM DLVRKLSGRL HKGENQ 516
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 1 | 508 | 1 | 476 | 0.8452 |
0.8942 |
| AF-Q58467-F1-model_v4 | 1 | 505 | 1 | 507 | 0.8379 |
0.8671 |
| AF-Q8DPI1-F1-model_v4 | 1 | 514 | 3 | 495 | 0.8329 |
0.8706 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 508 | 2 | 478 | 0.8317 |
0.8815 |
| AF-H9L497-F1-model_v4 | 1 | 510 | 1 | 486 | 0.8299 |
0.8771 |
| AF-P77377-F1-model_v4 | 1 | 510 | 1 | 486 | 0.8226 |
0.8702 |
| AF-Q9I1M8-F1-model_v4 | 2 | 498 | 1 | 469 | 0.802 |
0.8585 |
| AF-Q32ET1-F1-model_v4 | 1 | 501 | 1 | 511 | 0.8009 |
0.8405 |
| AF-P0AF16-F1-model_v4 | 1 | 501 | 1 | 511 | 0.799 |
0.8387 |
| AF-P37746-F1-model_v4 | 1 | 491 | 3 | 415 | 0.7988 |
0.9015 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 512 | 2 | 512 | 0.8252 |
0.8515 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 506 | 38 | 545 | 0.7785 |
0.8329 |
| QNU38870.1 | GT4 | 1 | 516 | 1 | 515 | 0.7355 |
0.8088 |
| QJC17489.1 | GT2 | 1 | 516 | 342 | 849 | 0.7093 |
0.9005 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 516 | 11 | 684 | 0.6691 |
0.876 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 513 | 3 | 589 | 0.6665 |
0.8585 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 516 | 4 | 553 | 0.6598 |
0.8272 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 2 | 516 | 1 | 665 | 0.6561 |
0.8194 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 516 | 8 | 674 | 0.655 |
0.8303 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 502 | 21 | 517 | 0.6421 |
0.8344 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 512 | 2 | 512 | 0.8252 |
0.8515 |
| A0A160T2N7 | GT28 | 1 | 506 | 38 | 545 | 0.7785 |
0.8329 |
| QNU38870.1 | GT4 | 1 | 516 | 1 | 515 | 0.7355 |
0.8088 |
| QJC17489.1 | GT2 | 1 | 516 | 342 | 849 | 0.7093 |
0.9005 |
| D1BIF1 | GT4 | 1 | 516 | 11 | 684 | 0.6691 |
0.876 |
| A0A3Q9G719 | GT4 | 1 | 513 | 3 | 589 | 0.6665 |
0.8585 |
| A0A3T0RPT8 | GT4 | 1 | 516 | 4 | 553 | 0.6598 |
0.8272 |
| A0A2U8PPB3 | GT4 | 2 | 516 | 1 | 665 | 0.6561 |
0.8194 |
| A0A517Z2I8 | GT2 | 1 | 516 | 8 | 674 | 0.655 |
0.8303 |
| F9ZKY1 | GT2 | 1 | 502 | 21 | 517 | 0.6421 |
0.8344 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 8 | 499 | 1 | 496 | 0.7982 |
0.8394 |
| 6nc6-assembly2.cif.gz_B | 6 | 500 | 1 | 461 | 0.7744 |
0.8367 |
| 7wag-assembly1.cif.gz_A | 2 | 502 | 2 | 513 | 0.7715 |
0.8185 |
| 6cc4-assembly1.cif.gz_A | 1 | 503 | 56 | 608 | 0.7451 |
0.8393 |
| 6fhz-assembly1.cif.gz_A | 6 | 431 | 8 | 436 | 0.7295 |
0.8274 |
| 5y50-assembly1.cif.gz_A | 2 | 428 | 6 | 436 | 0.6687 |
0.7677 |
| 4mlb-assembly1.cif.gz_C | 1 | 429 | 5 | 448 | 0.6576 |
0.7559 |
| 3wbn-assembly1.cif.gz_A | 1 | 429 | 3 | 446 | 0.6476 |
0.7439 |
| 6ids-assembly1.cif.gz_A | 1 | 429 | 6 | 432 | 0.6448 |
0.735 |
| 3vvs-assembly1.cif.gz_A | 1 | 429 | 4 | 440 | 0.6404 |
0.7323 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 4 | 515 | 1 | 505 | 0.8832 |
0.9078 |
| AF-Q58467-F1-model_v4 | 1 | 505 | 1 | 507 | 0.8379 |
0.8671 |
| AF-Q48457-F1-model_v4 | 1 | 509 | 2 | 485 | 0.8297 |
0.8758 |
| AF-P33699-F1-model_v4 | 1 | 512 | 5 | 490 | 0.8283 |
0.8776 |
| AF-P77377-F1-model_v4 | 1 | 510 | 1 | 486 | 0.8226 |
0.8702 |
| AF-D4GU68-F1-model_v4 | 1 | 509 | 2 | 472 | 0.8085 |
0.8645 |
| AF-O32273-F1-model_v4 | 1 | 510 | 6 | 483 | 0.807 |
0.8607 |
| AF-O67658-F1-model_v4 | 1 | 515 | 3 | 499 | 0.8053 |
0.8422 |
| AF-O34674-F1-model_v4 | 1 | 507 | 1 | 539 | 0.8023 |
0.8542 |
| AF-O34238-F1-model_v4 | 1 | 501 | 8 | 525 | 0.8012 |
0.8499 |