PROTEIN: HRGMv2_3185_4_64
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Protein File & Metadata
Source:
HRGMv2_3185_4_64.pdb
Genome ID:
Protein ID:
HRGMv2_3185_4_64
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Protein Sequence
MRTKRTLINL VYTLGQSLVL LLLGLITRKL FVTNFDAFVP GYSDTINNIF NFFSIAEFGV 60 GSVISYRLYE QIAAKDIDRI SRYMSLYKWA YRAIGAFIAL MAVVCAFFLP LLVVQEQEPD 120 WLMVYGIYAM TALSTLSSYF LITRRLMYTC TQQGYVCTRI DLAFNVATSL AKIAIALWIP 180 NYFLYFGIQI LFNTLANVVV ARRYKKDFPE LYDVKVSVRD FKELGIFHDL RYYLVHKLSN 240 TIYGSSDNIV ITSMRGAAMV TQTGNYSTVS TNVNSICNKI LDSFAAAIGS IVYDRDAEAD 300 GHAKKVFWGL DLFSYFFGSF VAVAYFCLFQ PFIRLWMGES YLLPMAYVFW FCMNEYIGWN 360 HRMVGSYRAV LGHFEEDQWF MVGSAVSNVV LSFALVIPFG LAGVVAATVF AHSLMWIGRA 420 RVVCRHYMKG CGWRYLGLQL LHWVSLFAIM ALTAWLCQLC GHGFLPFVAK VCIVAVVPNL 480 CNLLLYGWTS DAAYLRERGM ELVHKLSARL RKGENA 516
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 1 | 508 | 1 | 476 | 0.8443 |
0.8934 |
| AF-Q58467-F1-model_v4 | 1 | 505 | 1 | 507 | 0.8389 |
0.868 |
| AF-Q8DPI1-F1-model_v4 | 1 | 514 | 3 | 495 | 0.8322 |
0.87 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 508 | 2 | 478 | 0.8314 |
0.881 |
| AF-H9L497-F1-model_v4 | 1 | 510 | 1 | 486 | 0.8293 |
0.8765 |
| AF-P77377-F1-model_v4 | 1 | 510 | 1 | 486 | 0.8218 |
0.8694 |
| AF-Q9I1M8-F1-model_v4 | 2 | 498 | 1 | 469 | 0.8022 |
0.8589 |
| AF-Q32ET1-F1-model_v4 | 1 | 501 | 1 | 511 | 0.7999 |
0.8395 |
| AF-P37746-F1-model_v4 | 1 | 491 | 3 | 415 | 0.7987 |
0.9015 |
| AF-P0AF16-F1-model_v4 | 1 | 501 | 1 | 511 | 0.7981 |
0.8379 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 509 | 2 | 511 | 0.8231 |
0.8528 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 506 | 38 | 545 | 0.7773 |
0.8317 |
| QNU38870.1 | GT4 | 1 | 516 | 1 | 515 | 0.734 |
0.8073 |
| QJC17489.1 | GT2 | 1 | 516 | 342 | 849 | 0.71 |
0.9014 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 516 | 11 | 684 | 0.6683 |
0.8749 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 513 | 3 | 589 | 0.6656 |
0.8574 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 516 | 4 | 553 | 0.659 |
0.8262 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 2 | 516 | 1 | 665 | 0.6546 |
0.8175 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 516 | 8 | 702 | 0.6529 |
0.8275 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 502 | 21 | 517 | 0.6416 |
0.8338 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 509 | 2 | 511 | 0.8231 |
0.8528 |
| A0A160T2N7 | GT28 | 1 | 506 | 38 | 545 | 0.7773 |
0.8317 |
| QNU38870.1 | GT4 | 1 | 516 | 1 | 515 | 0.734 |
0.8073 |
| QJC17489.1 | GT2 | 1 | 516 | 342 | 849 | 0.71 |
0.9014 |
| D1BIF1 | GT4 | 1 | 516 | 11 | 684 | 0.6683 |
0.8749 |
| A0A3Q9G719 | GT4 | 1 | 513 | 3 | 589 | 0.6656 |
0.8574 |
| A0A3T0RPT8 | GT4 | 1 | 516 | 4 | 553 | 0.659 |
0.8262 |
| A0A2U8PPB3 | GT4 | 2 | 516 | 1 | 665 | 0.6546 |
0.8175 |
| A0A517Z2I8 | GT2 | 1 | 516 | 8 | 702 | 0.6529 |
0.8275 |
| F9ZKY1 | GT2 | 1 | 502 | 21 | 517 | 0.6416 |
0.8338 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 8 | 499 | 1 | 496 | 0.7975 |
0.8387 |
| 6nc6-assembly2.cif.gz_B | 6 | 500 | 1 | 461 | 0.7754 |
0.8376 |
| 7wag-assembly1.cif.gz_A | 2 | 502 | 2 | 513 | 0.7705 |
0.8176 |
| 6cc4-assembly1.cif.gz_A | 1 | 506 | 56 | 608 | 0.7449 |
0.8346 |
| 6fhz-assembly1.cif.gz_A | 6 | 431 | 8 | 436 | 0.7291 |
0.8275 |
| 5y50-assembly1.cif.gz_A | 2 | 428 | 6 | 436 | 0.6703 |
0.7692 |
| 3wbn-assembly1.cif.gz_A | 1 | 429 | 3 | 446 | 0.6502 |
0.7467 |
| 6ids-assembly1.cif.gz_A | 1 | 429 | 6 | 432 | 0.6476 |
0.7385 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 4 | 515 | 1 | 505 | 0.8839 |
0.9082 |
| AF-Q58467-F1-model_v4 | 1 | 505 | 1 | 507 | 0.8389 |
0.868 |
| AF-Q48457-F1-model_v4 | 1 | 509 | 2 | 485 | 0.829 |
0.8752 |
| AF-P33699-F1-model_v4 | 1 | 512 | 5 | 490 | 0.8277 |
0.8768 |
| AF-P77377-F1-model_v4 | 1 | 510 | 1 | 486 | 0.8218 |
0.8694 |
| AF-D4GU68-F1-model_v4 | 1 | 509 | 2 | 472 | 0.8089 |
0.8648 |
| AF-O32273-F1-model_v4 | 1 | 510 | 6 | 483 | 0.8059 |
0.8597 |
| AF-O67658-F1-model_v4 | 1 | 515 | 3 | 499 | 0.8045 |
0.8414 |
| AF-O34674-F1-model_v4 | 1 | 507 | 1 | 539 | 0.801 |
0.8534 |
| AF-O34238-F1-model_v4 | 1 | 501 | 8 | 525 | 0.8007 |
0.8493 |