dbCAN Logo

PROTEIN: HRGMv2_3185_20_31

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_3185_20_31.pdb
Genome ID:
HRGMv2_3185
Protein ID:
HRGMv2_3185_20_31

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
METIKLKVLN   ASGHTLLTCN   AGERVSMVYA   APYQPGDRIA   LEINTPGRYC   WVQFEDTMPE 60
ALVYIEKREI   NFHIPFGEQA   ITYSPKSFTG   SRHVIRARLA   EPDEIAARRN   LAFNPYDQHG 120
DTGYFPHASA   NVETRGEAVF   AARNAIDGVF   ENTSHGEYPY   QSWGINRDPN   AALTLEFGRP 180
VVLDELRLTL   RGDYPHDNYW   TSATVEFSDG   DRMTLSLTNS   RLPQRFPLPA   PKTVTGLVLK 240
ELIQAEGPSP   FPALTQIEAW   GRECAPEQEN   V 271
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q3TV70-F1-model_v4 107 265 1 140 0.6378 0.8579
AF-Q1ED21-F1-model_v4 107 265 1 141 0.6339 0.8512
AF-A0A0R4IY57-F1-model_v4 101 262 131 306 0.4339 0.7574
AF-A0A0N4STS3-F1-model_v4 106 265 163 310 0.4269 0.8159
AF-A0A175VWT6-F1-model_v4 77 265 11 496 0.3564 0.6526
AF-Q8IKW0-F1-model_v4 13 269 177 692 0.3309 0.5324
AF-Q9D2L5-F1-model_v4 16 269 52 308 0.3282 0.5177
AF-Q8I252-F1-model_v4 22 271 310 801 0.3179 0.5474
AF-Q640N1-F1-model_v4 2 268 23 538 0.2906 0.4802
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
B1C4D3 GH105 1 269 34 652 0.5728 0.9258
AF-A0A4Y6CEF2-F1-model_v4 CBM32 6 262 37 328 0.5146 0.6109
AF-S6D7U2-F1-model_v4 CBM47 6 268 30 436 0.4438 0.5806
AF-A0A346DVI5-F1-model_v4 CBM47 6 268 7 436 0.4438 0.581
AF-Q1D2P6-F1-model_v4 CBM32 12 262 109 407 0.4421 0.5797
AF-A0A6P1Q719-F1-model_v4 CBM47 7 268 31 436 0.4353 0.5724
AF-C7JFL3-F1-model_v4 CBM47 7 268 9 436 0.4302 0.5655
C7JFL3 CBM47 7 268 9 436 0.4302 0.5655
AF-A0A5B9GFR0-F1-model_v4 CBM47 7 269 9 437 0.4269 0.5591
AF-H2JP18-F1-model_v4 CBM32 , GH16_3 14 265 85 347 0.4157 0.6235
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
B1C4D3 GH105 1 269 34 652 0.5728 0.9258
UNT96525.1 CBM32 9 267 2 234 0.5572 0.6196
A0A1Y0H0Z5 CBM47 103 268 23 183 0.5284 0.7484
UVH36227.1 CBM47 3 267 195 490 0.4526 0.6239
A0A9E9K109 CBM32 9 271 1 555 0.4431 0.6223
Q1D2P6 CBM32 12 262 109 407 0.4421 0.5797
F2VQW1 CBM47 103 271 18 289 0.4413 0.7462
Q4SQR7 CBM47 103 266 106 267 0.4369 0.7461
C7JFL3 CBM47 7 268 9 436 0.4302 0.5655
A0A410GHY9 CBM47 106 267 161 316 0.4294 0.7856
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5y4m-assembly1.cif.gz_A 106 264 1 150 0.6153 0.8079
8ivw-assembly3.cif.gz_G 1 271 5 378 0.4649 0.5695
3cqo-assembly1.cif.gz_C 106 271 1 177 0.4609 0.7712
8ivw-assembly1.cif.gz_A 1 271 5 401 0.459 0.5723
8ivw-assembly4.cif.gz_J 1 271 5 401 0.4513 0.566
8ivw-assembly2.cif.gz_D 1 271 5 395 0.4497 0.5598
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q3TV70-F1-model_v4 107 265 1 140 0.6378 0.8579
AF-Q1ED21-F1-model_v4 107 265 1 141 0.6339 0.8512
AF-Q9RKU4-F1-model_v4 3 269 117 368 0.4822 0.611
AF-Q82LL5-F1-model_v4 4 269 118 368 0.4788 0.6082
AF-Q9D2L5-F1-model_v4 16 269 52 308 0.3282 0.5177
AF-Q640N1-F1-model_v4 2 268 23 538 0.2906 0.4802
AF-Q58L91-F1-model_v4 106 269 1145 1430 0.2716 0.7336
Download Full SwissProt Results