PROTEIN: HRGMv2_3185_17_19
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Protein File & Metadata
Source:
HRGMv2_3185_17_19.pdb
Genome ID:
Protein ID:
HRGMv2_3185_17_19
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Protein Sequence
MNTFVGTQCI SGRYHFGEDC PLVEAARAAY EMGSNILKFS MTEQGISEKA CGMTLAQMAE 60 RYEPFRTVLD MPFEYYCIWA QPAIDWHQMP TAETERYVYT SLYDLTAHLL RTYDGSGKTF 120 LLGNWEGDWL LLGGFTPEKD GDPAVAQSML EFFRIRQKAI EDARAAVPHQ NVRVGGYIEV 180 NRVLDAKDKG MCRLTNQVLP KVAVDLVSYS SYDSLMPFRV TEALDYIESQ AVFTDYFTGV 240 FERKVFVGEY DGYFDYHVMG PSTPEMQKYQ TNLVISAALA WGSPFVLFWE MYNNEYERLR 300 EGDGFWLIDE NNVKQPTYYL HQDYLVKLTA ARCAYAHFGG NLHRDFLLPA MPLLSRRKVF 360 EIVSGLPGIA DRWQGECEKE YEASAEEFAR SCGFDKRKLP SDASGPSLWK KYLNSRDFTA 420 RLFENRKACF ESPEAFLQVV FPWM 444
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-C9K1I7-F1-model_v4 | GH39 | 1 | 350 | 21 | 343 | 0.6399 |
0.7773 |
| A0A2Z5QL98 | GH39 | 1 | 441 | 21 | 342 | 0.6364 |
0.7747 |
| AF-A0A2Z5QL98-F1-model_v4 | GH39 | 1 | 441 | 21 | 342 | 0.6364 |
0.7747 |
| AF-A0A0P0YSG8-F1-model_v4 | GH39 | 1 | 353 | 20 | 333 | 0.6311 |
0.7744 |
| AF-A0A6B9GGC2-F1-model_v4 | GH39 | 1 | 352 | 22 | 336 | 0.6299 |
0.7738 |
| QHC44347.1 | GH39 | 1 | 412 | 23 | 429 | 0.6293 |
0.6919 |
| AF-R4JZW8-F1-model_v4 | GH39 | 1 | 444 | 34 | 408 | 0.6286 |
0.7243 |
| A0A1C3SZV1 | GH39 | 1 | 385 | 29 | 342 | 0.6271 |
0.7791 |
| AF-A0A1C3SZV1-F1-model_v4 | GH39 | 1 | 385 | 29 | 342 | 0.6271 |
0.7791 |
| AF-G0LCZ8-F1-model_v4 | GH39 | 1 | 350 | 16 | 338 | 0.6235 |
0.7515 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1C3T031 | GH39 | 1 | 440 | 20 | 394 | 0.6471 |
0.7342 |
| QLJ65213.1 | GH39 | 1 | 343 | 22 | 339 | 0.6444 |
0.7887 |
| A0A0P0YQF7 | GH39 | 1 | 329 | 23 | 345 | 0.6396 |
0.7778 |
| UHM91440.1 | GH39 | 1 | 332 | 25 | 340 | 0.637 |
0.785 |
| A0A2Z5QL98 | GH39 | 1 | 441 | 21 | 342 | 0.6364 |
0.7747 |
| A0A0P0YS48 | GH39 | 1 | 436 | 23 | 343 | 0.6328 |
0.7731 |
| A0A6B9GGC2 | GH39 | 1 | 352 | 22 | 336 | 0.6299 |
0.7738 |
| QHC44347.1 | GH39 | 1 | 412 | 23 | 429 | 0.6293 |
0.6919 |
| A0A1C3SZV1 | GH39 | 1 | 385 | 29 | 342 | 0.6271 |
0.7791 |
| QUT14842.1 | GH39 | 1 | 444 | 19 | 383 | 0.6259 |
0.7187 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.