PROTEIN: HRGMv2_3177_27_18
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Protein File & Metadata
Source:
HRGMv2_3177_27_18.pdb
Genome ID:
Protein ID:
HRGMv2_3177_27_18
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Protein Sequence
MEFISVNQRK FSVEKLLGKG KGGYSYLVTD GKTRFVVKQI HHEPCSYYQF GNKLQSELND 60 YEKLCKIGIP MPKLLDVDVE NERILKEYVE GYTIFELVKR NEMLDDYINQ VNQMCSLLYK 120 ANTNIDYFPT NFVVQAGKLF YIDYECNDYM QEWDFEHWGI KYWSKTDEFN QYLHSNNIP 179
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C6TNL5-F1-model_v4 | 7 | 170 | 5 | 184 | 0.6827 |
0.8476 |
| AF-Q94K14-F1-model_v4 | 7 | 171 | 6 | 185 | 0.6796 |
0.8395 |
| AF-A0A0R0FJF0-F1-model_v4 | 6 | 171 | 11 | 196 | 0.6702 |
0.838 |
| AF-B5WWL2-F1-model_v4 | 1 | 167 | 16 | 205 | 0.648 |
0.8206 |
| AF-A0A3P7DXE4-F1-model_v4 | 8 | 171 | 9 | 192 | 0.6413 |
0.8111 |
| AF-Q387G5-F1-model_v4 | 2 | 168 | 1 | 205 | 0.6405 |
0.8129 |
| AF-Q54W07-F1-model_v4 | 4 | 168 | 31 | 214 | 0.6349 |
0.8192 |
| AF-A0A044SKW8-F1-model_v4 | 1 | 172 | 14 | 228 | 0.5908 |
0.8069 |
| AF-A0A0P0X092-F1-model_v4 | 5 | 171 | 31 | 248 | 0.5864 |
0.7891 |
| AF-J9F7G2-F1-model_v4 | 1 | 171 | 14 | 227 | 0.5786 |
0.7952 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W5W9C4-F1-model_v4 | CBM2 | 1 | 179 | 10 | 421 | 0.5153 |
0.7553 |
| AF-A0A810N340-F1-model_v4 | CBM32 | 1 | 175 | 10 | 482 | 0.4868 |
0.7609 |
| WDZ83731.1 | CBM32 | 1 | 178 | 30 | 636 | 0.4763 |
0.7627 |
| AF-A0A1C3N346-F1-model_v4 | CBM13 | 1 | 176 | 1 | 218 | 0.4641 |
0.7641 |
| AF-A0A6M4X4P9-F1-model_v4 | CBM13 | 1 | 172 | 8 | 222 | 0.4547 |
0.7555 |
| AF-A0A1M4E3Z7-F1-model_v4 | GH6 | 1 | 176 | 6 | 216 | 0.4413 |
0.7333 |
| AF-A0A1V0A626-F1-model_v4 | GH6 | 5 | 172 | 1 | 201 | 0.4096 |
0.7451 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| R4LU84 | CBM32 | 1 | 172 | 10 | 228 | 0.4771 |
0.7571 |
| WDZ83731.1 | CBM32 | 1 | 178 | 30 | 636 | 0.4763 |
0.7627 |
| A0A1C3N346 | CBM13 | 1 | 176 | 1 | 218 | 0.4641 |
0.7641 |
| QYC39793.1 | GH6 | 1 | 177 | 5 | 646 | 0.4483 |
0.7488 |
| WFD31273.1 | PL35 | 5 | 179 | 151 | 756 | 0.422 |
0.8006 |
| A0A1V0A626 | GH6 | 5 | 172 | 1 | 201 | 0.4096 |
0.7451 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4e20-assembly1.cif.gz_A | 6 | 175 | 5 | 215 | 0.6075 |
0.7986 |
| 6x8g-assembly1.cif.gz_A | 6 | 175 | 4 | 210 | 0.6032 |
0.7927 |
| 7ukz-assembly1.cif.gz_A | 5 | 172 | 1 | 203 | 0.5826 |
0.786 |
| 7ukz-assembly6.cif.gz_F | 5 | 172 | 1 | 202 | 0.5797 |
0.7799 |
| 6oqo-assembly1.cif.gz_A | 8 | 172 | 1 | 191 | 0.579 |
0.7671 |
| 3blr-assembly1.cif.gz_A | 6 | 172 | 8 | 211 | 0.5742 |
0.7845 |
| 4p2k-assembly1.cif.gz_A | 6 | 172 | 10 | 203 | 0.5673 |
0.7376 |
| 2qoc-assembly1.cif.gz_A | 5 | 172 | 4 | 204 | 0.55 |
0.7332 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O32057-F1-model_v4 | 4 | 176 | 3 | 196 | 0.6609 |
0.769 |
| AF-Q54W07-F1-model_v4 | 4 | 168 | 31 | 214 | 0.6349 |
0.8192 |
| AF-O31435-F1-model_v4 | 1 | 167 | 16 | 202 | 0.6329 |
0.8148 |
| AF-Q6M056-F1-model_v4 | 14 | 169 | 350 | 514 | 0.4674 |
0.8098 |
| AF-A6US28-F1-model_v4 | 14 | 169 | 349 | 513 | 0.4666 |
0.808 |
| AF-A6VJ51-F1-model_v4 | 14 | 169 | 349 | 513 | 0.4664 |
0.8077 |
| AF-Q60680-F1-model_v4 | 1 | 179 | 1 | 573 | 0.4597 |
0.7571 |
| AF-P49695-F1-model_v4 | 1 | 175 | 5 | 218 | 0.4459 |
0.7482 |
| AF-Q55GU0-F1-model_v4 | 5 | 175 | 657 | 863 | 0.4407 |
0.7855 |