PROTEIN: HRGMv2_3176_1_222
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Protein File & Metadata
Source:
HRGMv2_3176_1_222.pdb
Genome ID:
Protein ID:
HRGMv2_3176_1_222
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Protein Sequence
MSEKTKKKFA FPRFQPQDIV TILFAVLIFY INFKIVGKCY NPFVYNDEMG YWTHAAEMAG 60 LDWHGVSKTL AWYSFGYSFM LAPLMKIISD TVILYRAAII LNICMEIVSY FLFVYIIRYL 120 FPKIGKLPTS FVSAAAILYT SYQMNAGIAF SETALLFVTT VIVFTVVRII QKPTYLNLGC 180 LGILSAYLFM IHNRTIGIVA SAVLIVALGF IFKKIDYKKV GVFTLTLVIG IVCNKLVRGY 240 LESALWPSGK AGGNDAGSVF GKLKAAFSSV DAIKKLVSIM AAQGFAVSAA TMCLVLFALW 300 AVMRRIIAAV GKTTLALKEK KKLDCNIFDE RIFVLVFIFC AFISTWMISS VFMFDFQRID 360 HVLYTRYFDI IVGVLVMIGI CYLYETEKID FGFMLLIPFI MRIGAGRASV MMQYVKAPVF 420 NKVCSPGICR LYEFNGQNFH AYITWSVSLF FLMAFIMYAL KKHKLGIFAV SIICICCFNK 480 NTPSAVEAIT INQDAYAGDR AMIDRNKEIF ETGNVYMTPS VGTFASFLQY ELNDVRVDFV 540 YDLEELNENS YVFANKSDIV SFLDYNIIDN SDKHIIVSAV ADEENSGNLP LSYMNTFDYS 600 YYIADEDIIE SNPANNYVCY GPYLNLDIGE YTFSLDMDFD KISGENIGFA EIRSSSVNTV 660 YDHIEITDDM ISKDGSLDID LNANVGVSIS DMEIVVFLYE PTEISMQLNS IQVDTKE 717
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUZ2-F1-model_v4 | 16 | 585 | 5 | 478 | 0.6131 |
0.7508 |
| AF-K0F8A5-F1-model_v4 | 12 | 583 | 19 | 668 | 0.6099 |
0.7416 |
| AF-Q9HY61-F1-model_v4 | 15 | 582 | 1 | 549 | 0.6087 |
0.6996 |
| AF-Q8VDB2-F1-model_v4 | 12 | 588 | 2 | 486 | 0.6036 |
0.7302 |
| AF-B1WBY3-F1-model_v4 | 13 | 588 | 3 | 488 | 0.6022 |
0.7288 |
| AF-Q9BV10-F1-model_v4 | 14 | 588 | 3 | 488 | 0.6022 |
0.7287 |
| AF-Q32DT1-F1-model_v4 | 15 | 581 | 1 | 550 | 0.6005 |
0.6905 |
| AF-O52327-F1-model_v4 | 15 | 581 | 1 | 547 | 0.5989 |
0.6895 |
| AF-K0EVV4-F1-model_v4 | 1 | 717 | 11 | 662 | 0.5982 |
0.6455 |
| AF-K0EVQ0-F1-model_v4 | 9 | 583 | 1 | 552 | 0.598 |
0.6859 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3M0CTC8-F1-model_v4 | GT83 | 1 | 586 | 1 | 579 | 0.6478 |
0.7298 |
| AF-Q7NFE4-F1-model_v4 | GT83 | 5 | 695 | 2 | 568 | 0.645 |
0.7331 |
| A0A4V0I1M5 | GT83 | 14 | 582 | 1 | 561 | 0.645 |
0.7396 |
| AF-A0A6C2YNQ2-F1-model_v4 | GT83 | 7 | 582 | 16 | 504 | 0.6406 |
0.7827 |
| AF-F2I0U0-F1-model_v4 | GT0 | 15 | 574 | 1 | 439 | 0.6359 |
0.7966 |
| AF-G7URS4-F1-model_v4 | GT83 | 13 | 584 | 10 | 501 | 0.6356 |
0.7718 |
| AF-A0A1Y0HA72-F1-model_v4 | GT83 | 15 | 582 | 11 | 488 | 0.6355 |
0.779 |
| AF-M1R7D2-F1-model_v4 | GT83 | 13 | 587 | 1 | 463 | 0.6316 |
0.7773 |
| AF-B4U8T7-F1-model_v4 | GT83 | 13 | 717 | 1 | 466 | 0.6305 |
0.7725 |
| UCV14583.1 | GT83 | 13 | 581 | 10 | 486 | 0.6301 |
0.7747 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3M0CTC8 | GT83 | 1 | 586 | 1 | 579 | 0.6478 |
0.7298 |
| A0A4V0I1M5 | GT83 | 14 | 582 | 1 | 561 | 0.645 |
0.7396 |
| A0A0S3QT15 | GT83 | 17 | 586 | 2 | 453 | 0.6425 |
0.7971 |
| A0A6C2YNQ2 | GT83 | 7 | 582 | 16 | 504 | 0.6406 |
0.7827 |
| A0A4P6HEB7 | GT83 | 15 | 583 | 28 | 492 | 0.6398 |
0.8167 |
| A0A068NUM4 | GT83 | 23 | 580 | 1 | 475 | 0.6374 |
0.7752 |
| A0A1Y0HA72 | GT83 | 15 | 582 | 11 | 488 | 0.6355 |
0.779 |
| A0A518AYL4 | GT83 | 13 | 582 | 4 | 484 | 0.6325 |
0.7739 |
| D5MI18 | GT83 | 11 | 585 | 14 | 566 | 0.632 |
0.7331 |
| UNK49813.1 | GT83 | 13 | 580 | 16 | 508 | 0.6313 |
0.7684 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5f15-assembly1.cif.gz_A | 16 | 607 | 1 | 541 | 0.6135 |
0.7092 |
| 5ezm-assembly1.cif.gz_A | 15 | 607 | 1 | 537 | 0.6023 |
0.6987 |
| 6s7o-assembly1.cif.gz_A | 11 | 717 | 7 | 656 | 0.5292 |
0.5702 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67270-F1-model_v4 | 17 | 580 | 1 | 499 | 0.6278 |
0.749 |
| AF-Q1MJ97-F1-model_v4 | 10 | 581 | 1 | 492 | 0.6158 |
0.7411 |
| AF-Q1MLH5-F1-model_v4 | 16 | 581 | 1 | 468 | 0.6145 |
0.7561 |
| AF-Q9HY61-F1-model_v4 | 15 | 582 | 1 | 549 | 0.6087 |
0.6996 |
| AF-A6V1N8-F1-model_v4 | 15 | 582 | 1 | 549 | 0.6081 |
0.6989 |
| AF-B7VBN0-F1-model_v4 | 15 | 582 | 1 | 549 | 0.6079 |
0.6988 |
| AF-Q4KC80-F1-model_v4 | 15 | 583 | 1 | 549 | 0.6068 |
0.6973 |
| AF-Q02R27-F1-model_v4 | 15 | 582 | 1 | 549 | 0.6068 |
0.6976 |
| AF-Q3KCB9-F1-model_v4 | 15 | 582 | 1 | 549 | 0.6048 |
0.6954 |
| AF-Q8VDB2-F1-model_v4 | 12 | 588 | 2 | 486 | 0.6036 |
0.7302 |