PROTEIN: HRGMv2_3103_5_79
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Protein File & Metadata
Source:
HRGMv2_3103_5_79.pdb
Genome ID:
Protein ID:
HRGMv2_3103_5_79
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Protein Sequence
MKKKTALAAL LLAAACVFSG CGADKTLYRE MESLQKQAAT LESGVITLTV QFEESGAPGE 60 YAAELAFKQT ENGAYAYCQK QFDQNEQIVF CEYSDGNQTK QWLVGRGWEE IGGAQFTKET 120 PHRYLQMISS PYERKMIQSI EKEEDENGTR YILAMNASRV SKACYPDGAF TVSEQTVTLT 180 FDTEEKLTGY SENTILKQGH SDTENSYRVD LYCKEHNAVE KIEAPQLRER FGQAK 235
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CD80-F1-model_v4 | 15 | 223 | 38 | 233 | 0.5907 |
0.7202 |
| AF-P9WK55-F1-model_v4 | 2 | 229 | 21 | 244 | 0.5818 |
0.6517 |
| AF-Q9CCP6-F1-model_v4 | 26 | 230 | 40 | 238 | 0.5604 |
0.6823 |
| AF-P9WK47-F1-model_v4 | 14 | 227 | 47 | 261 | 0.5442 |
0.648 |
| AF-P61316-F1-model_v4 | 17 | 231 | 12 | 196 | 0.5203 |
0.6384 |
| AF-A0A0H3GKZ2-F1-model_v4 | 18 | 231 | 13 | 196 | 0.5191 |
0.6388 |
| AF-A0A077ZKH5-F1-model_v4 | 17 | 231 | 13 | 197 | 0.519 |
0.6375 |
| AF-Q32E10-F1-model_v4 | 19 | 231 | 14 | 197 | 0.5175 |
0.6388 |
| AF-Q8ZQD4-F1-model_v4 | 17 | 231 | 13 | 196 | 0.5123 |
0.632 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A857DH37-F1-model_v4 | CBM50 | 21 | 230 | 21 | 369 | 0.5067 |
0.7694 |
| AF-K4L5C8-F1-model_v4 | CBM50 | 22 | 230 | 22 | 369 | 0.5043 |
0.7692 |
| AF-I4A8B5-F1-model_v4 | CBM50 | 22 | 230 | 21 | 372 | 0.4917 |
0.7689 |
| AF-A0A098AWY8-F1-model_v4 | CBM50 | 22 | 230 | 21 | 374 | 0.4854 |
0.7605 |
| AF-A0A1P8WH16-F1-model_v4 | CE12 , GH43_5 , PL22 | 23 | 233 | 31 | 413 | 0.3788 |
0.7069 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A857DH37 | CBM50 | 21 | 230 | 21 | 369 | 0.5067 |
0.7694 |
| L0FC34 | CBM50 | 23 | 230 | 22 | 375 | 0.4915 |
0.765 |
| A0A1P8WH16 | CE12 , GH43_5 , PL22 | 23 | 233 | 31 | 413 | 0.3788 |
0.7069 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3wju-assembly1.cif.gz_A | 22 | 217 | 1 | 178 | 0.5452 |
0.6535 |
| 4ki3-assembly1.cif.gz_D | 28 | 231 | 1 | 173 | 0.5286 |
0.6512 |
| 4ki3-assembly4.cif.gz_L | 25 | 231 | 1 | 170 | 0.5279 |
0.6545 |
| 4ki3-assembly3.cif.gz_G | 25 | 231 | 1 | 173 | 0.5279 |
0.6506 |
| 4ki3-assembly3.cif.gz_I | 25 | 231 | 1 | 174 | 0.5245 |
0.6445 |
| 8v1k-assembly2.cif.gz_B | 28 | 232 | 1 | 178 | 0.5174 |
0.6307 |
| 2w7q-assembly1.cif.gz_A | 21 | 225 | 4 | 181 | 0.5129 |
0.6313 |
| 2zpd-assembly1.cif.gz_A | 25 | 231 | 1 | 175 | 0.5002 |
0.617 |
| 7z6x-assembly1.cif.gz_A | 25 | 231 | 1 | 175 | 0.4938 |
0.6097 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CD80-F1-model_v4 | 15 | 223 | 38 | 233 | 0.5907 |
0.7202 |
| AF-P9WK55-F1-model_v4 | 2 | 229 | 21 | 244 | 0.5818 |
0.6517 |
| AF-P41109-F1-model_v4 | 25 | 231 | 37 | 270 | 0.578 |
0.7272 |
| AF-A5U2B3-F1-model_v4 | 4 | 230 | 22 | 236 | 0.5646 |
0.6447 |
| AF-Q7U094-F1-model_v4 | 3 | 229 | 29 | 244 | 0.5634 |
0.6495 |
| AF-P9WK54-F1-model_v4 | 3 | 226 | 29 | 244 | 0.5632 |
0.6497 |
| AF-P9WK44-F1-model_v4 | 5 | 229 | 24 | 236 | 0.5622 |
0.647 |
| AF-Q9CCP6-F1-model_v4 | 26 | 230 | 40 | 238 | 0.5604 |
0.6823 |
| AF-P86729-F1-model_v4 | 29 | 229 | 16 | 198 | 0.5493 |
0.6728 |
| AF-P9WK47-F1-model_v4 | 14 | 227 | 47 | 261 | 0.5442 |
0.648 |