PROTEIN: HRGMv2_3101_58_13
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Protein File & Metadata
Source:
HRGMv2_3101_58_13.pdb
Genome ID:
Protein ID:
HRGMv2_3101_58_13
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Protein Sequence
MKKQLALSMS AAMALTLLAG CGGSGSSSSA AASGSDTAEA AATGAPTITF MMPTFYGTEF 60 QNENSDQVIQ AYTDYTGINV EWRLEANDTY KDKFGLTLMD KDNMPMVLTA SGALDANIVD 120 AAKAGAFWDL SPYLEDSTAY PNLSQANKDV LKGLTVNSQV IGLPRTRSIG RYGLAYRTDW 180 AEAVGITEPP ETIEDVYNML YAFTYNDPDG NGVDDTYGLE LCKYTGPLDV IQTWFGCGNE 240 WVEQDGQLVP VHQTAEYKEA LDWMRKIYEE GLVRPDWAAV DTSTWEDGCK TGEAGCFLDT 300 MDGAKRIWNY FTDNNVTSVV DPSTTATMTM VGPIAKEAGG EPHTLATSGY NGFYLITKDG 360 AKTEEDVKNC LTFLDKMNDD AMLELADYGI EDISYSLNEN GEVVLNPDLD ASQTPNAGLN 420 QAVCYIPNRS SVSHPLEKRE SQLQSEACEE VNEAHAVFNP ALGYLANSEA NAQYGTDIEL 480 IIDDARTQYI CGQIDEAGLD AASQQWLDRG GSEVIAEVNE LYQADTTK 528
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 16 | 527 | 4 | 502 | 0.8499 |
0.889 |
| AF-A0A133CSA1-F1-model_v4 | 42 | 513 | 25 | 427 | 0.6772 |
0.8049 |
| AF-A0A133D019-F1-model_v4 | 26 | 528 | 25 | 485 | 0.6666 |
0.7483 |
| AF-P76042-F1-model_v4 | 42 | 514 | 24 | 430 | 0.6644 |
0.7848 |
| AF-A0A132ZDH4-F1-model_v4 | 39 | 510 | 24 | 427 | 0.6592 |
0.7811 |
| AF-A0A133CDW9-F1-model_v4 | 27 | 520 | 29 | 444 | 0.6439 |
0.7591 |
| AF-Q8DNU8-F1-model_v4 | 41 | 520 | 35 | 441 | 0.643 |
0.7702 |
| AF-Q7AQ51-F1-model_v4 | 12 | 518 | 7 | 445 | 0.6355 |
0.7163 |
| AF-K0F2E6-F1-model_v4 | 45 | 525 | 42 | 442 | 0.6352 |
0.77 |
| AF-K0F8J3-F1-model_v4 | 26 | 518 | 18 | 435 | 0.6335 |
0.7374 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 42 | 527 | 41 | 506 | 0.7014 |
0.7921 |
| A0A9Q8PNJ5 | GH4 | 5 | 517 | 226 | 866 | 0.5193 |
0.667 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 42 | 527 | 41 | 506 | 0.7014 |
0.7921 |
| A0A9Q8PNJ5 | GH4 | 5 | 517 | 226 | 866 | 0.5193 |
0.667 |
| A0A1Q2TKJ3 | GH49 | 1 | 518 | 95 | 797 | 0.503 |
0.6222 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5g5y-assembly1.cif.gz_A | 42 | 528 | 1 | 493 | 0.7119 |
0.7673 |
| 6fth-assembly1.cif.gz_A | 39 | 528 | 1 | 496 | 0.7081 |
0.7602 |
| 3omb-assembly1.cif.gz_A | 35 | 528 | 1 | 503 | 0.7056 |
0.757 |
| 2uvg-assembly1.cif.gz_A | 46 | 521 | 1 | 401 | 0.7016 |
0.8128 |
| 4ovj-assembly1.cif.gz_A | 42 | 513 | 2 | 396 | 0.6975 |
0.8137 |
| 6dtr-assembly1.cif.gz_A | 46 | 517 | 1 | 393 | 0.6955 |
0.8123 |
| 3u1o-assembly2.cif.gz_B | 44 | 518 | 3 | 407 | 0.6939 |
0.8029 |
| 4hs7-assembly2.cif.gz_B | 44 | 517 | 2 | 376 | 0.6911 |
0.8223 |
| 3quf-assembly1.cif.gz_A | 43 | 514 | 1 | 385 | 0.6906 |
0.8126 |
| 4jxi-assembly2.cif.gz_B | 40 | 517 | 1 | 405 | 0.6896 |
0.7966 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q795R2-F1-model_v4 | 40 | 526 | 35 | 498 | 0.8477 |
0.9429 |
| AF-P37966-F1-model_v4 | 42 | 528 | 31 | 502 | 0.7884 |
0.8723 |
| AF-O31518-F1-model_v4 | 42 | 517 | 29 | 427 | 0.7005 |
0.8386 |
| AF-A0A0H2URD6-F1-model_v4 | 32 | 528 | 27 | 537 | 0.6829 |
0.7514 |
| AF-P76042-F1-model_v4 | 42 | 514 | 24 | 430 | 0.6644 |
0.7848 |
| AF-P94528-F1-model_v4 | 33 | 513 | 25 | 433 | 0.6394 |
0.7568 |
| AF-Q00749-F1-model_v4 | 38 | 517 | 29 | 420 | 0.6393 |
0.7735 |
| AF-Q9K491-F1-model_v4 | 42 | 517 | 33 | 424 | 0.6389 |
0.7765 |
| AF-Q8FVS7-F1-model_v4 | 39 | 517 | 20 | 411 | 0.6387 |
0.764 |
| AF-Q578M8-F1-model_v4 | 39 | 517 | 20 | 411 | 0.637 |
0.7621 |