dbCAN Logo

PROTEIN: HRGMv2_2976_17_16

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_2976_17_16.pdb
Genome ID:
HRGMv2_2976
Protein ID:
HRGMv2_2976_17_16

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MLDDHAVSYG   RRTNGKYIIL   LLTLALIALL   SAWALEHKGT   IQSTLFRLLP   QKQQPMDWQD 60
APCNGASSVF   GCDDGAVLLT   DGLLCHLDGS   GTVTAQLDTG   EDSLTPLSGS   IPGAWGENTL 120
YLWNDGAFSS   IFVETGILGA   CADENHIALI   SKGSGYLTNT   ILSDALGQEQ   GSIGLTDAAM 180
TELACTEDVL   AGLCMDKLGQ   WSLRLYDFSG   NLRTEIPLGE   ESRCHILGTE   QGFLVLTAHR 240
LRFYETNGTE   TGSYTLPKGT   ISCGTVAGEG   AVVLADCGST   GTLYFISSAG   KLLGETAISA 300
QVRRLTGWSD   RVYVLDYQAL   RVYDRQGELQ   ATLIQGARAA   NLSPNGSNLW   LVGNGEVSRI 360
SIS 363
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1C1C8A4-F1-model_v4 55 362 32 375 0.6755 0.819
AF-K0EYG0-F1-model_v4 6 359 6 411 0.6677 0.7481
AF-Q9CCH4-F1-model_v4 7 359 7 407 0.6663 0.7468
AF-O05854-F1-model_v4 8 359 8 407 0.6649 0.747
AF-A0A077Z636-F1-model_v4 56 363 55 391 0.638 0.7932
AF-A0A0K0IQ61-F1-model_v4 59 360 1 335 0.629 0.7415
AF-A0A0N4U587-F1-model_v4 59 359 1 337 0.626 0.7417
AF-Q0PAA6-F1-model_v4 88 363 14 304 0.6243 0.762
AF-Q5MNZ6-F1-model_v4 62 360 10 344 0.6212 0.7459
AF-Q8CFE8-F1-model_v4 56 363 90 463 0.6211 0.8245
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A7S7NPD7-F1-model_v4 PL22 26 363 4 350 0.6364 0.6902
A0A915XQ96 PL22 28 363 21 371 0.6037 0.68
AF-A0A2L0NE93-F1-model_v4 GH23 65 355 131 467 0.5273 0.7389
AF-A0A1B2HED9-F1-model_v4 GH184 64 355 208 528 0.4999 0.7294
A0A9Y2NDP8 GH73 73 363 58 529 0.483 0.7137
AF-A0A6H1NYB0-F1-model_v4 CBM50 64 363 74 401 0.4759 0.7652
A0A9J7A542 CBM2 64 346 32 281 0.4689 0.6778
AF-A0A7S7NQE7-F1-model_v4 PL0 56 363 675 1042 0.4625 0.8042
WFO74711.1 GH0 5 363 1 588 0.4611 0.6242
AF-Q54RP0-F1-model_v4 GT77 59 360 293 648 0.4483 0.6813
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
BCS37116.1 PL22 30 363 9 351 0.6282 0.6901
A0A915XQ96 PL22 28 363 21 371 0.6037 0.68
B0C834 PL11 54 363 53 454 0.586 0.7828
BDG61813.1 CBM50 40 363 57 448 0.5855 0.74
Q67JA2 CBM50 55 363 139 452 0.5846 0.7663
A0A2L0NE93 GH23 65 355 131 467 0.5273 0.7389
QYR21985.1 CBM50 71 363 1 333 0.5262 0.8184
A0A1B2HED9 GH184 64 355 208 528 0.4999 0.7294
WBP91217.1 GH23 3 345 1 428 0.4857 0.57
APR80663.1 GH25 57 363 168 581 0.4838 0.6988
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7awz-assembly1.cif.gz_A 64 363 2 304 0.7077 0.8096
6y7o-assembly2.cif.gz_B 56 363 3 317 0.7052 0.7971
7ax2-assembly1.cif.gz_A 65 363 1 299 0.7032 0.8042
7awy-assembly1.cif.gz_A 65 363 1 302 0.7027 0.8046
6g6n-assembly3.cif.gz_C 56 363 3 317 0.7025 0.7944
5naf-assembly3.cif.gz_C 57 363 7 339 0.6985 0.8134
6tjg-assembly1.cif.gz_A 56 362 6 320 0.6907 0.7841
6whh-assembly1.cif.gz_A 57 362 8 331 0.6899 0.7975
7ax0-assembly1.cif.gz_A 64 363 7 307 0.6882 0.7931
5naf-assembly2.cif.gz_B 57 363 10 348 0.6873 0.8103
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O13982-F1-model_v4 56 363 55 399 0.6583 0.8203
AF-P42111-F1-model_v4 57 362 88 410 0.6227 0.7892
AF-Q640T2-F1-model_v4 62 360 10 344 0.6213 0.7464
AF-Q68F45-F1-model_v4 62 360 10 344 0.6212 0.7462
AF-Q5MNZ6-F1-model_v4 62 360 10 344 0.6212 0.7459
AF-F4I241-F1-model_v4 57 360 1 314 0.6203 0.7041
AF-Q7ZXK9-F1-model_v4 56 362 99 476 0.6169 0.8284
AF-Q6CN23-F1-model_v4 61 357 13 339 0.6164 0.7404
AF-Q9P6N1-F1-model_v4 59 355 1 335 0.6157 0.7359
AF-Q6X9E4-F1-model_v4 56 363 90 464 0.6117 0.8112
Download Full SwissProt Results