PROTEIN: HRGMv2_2906_6_28
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Protein File & Metadata
Source:
HRGMv2_2906_6_28.pdb
Genome ID:
Protein ID:
HRGMv2_2906_6_28
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Protein Sequence
MKKTNRNPNR TDSSKTFYST RGVTLLLSVV LVLAVLALLG MYSLGVIRPP ASLSALFGTT 60 ETTARPEQTA DIETAAEAPA LTLALAREEY AAALGDMQMP SAYYRAYTVS IYGGNAVTAT 120 QYEAVVRDAN WWVREARDGV ILSTAVCRDG AVQITDNTQN STVTAAAASA DTPDGIRLAE 180 RMGVLPLGEL TALIGTLGAG GTSDYGGGIA GYSLALAPAR GTGENVFTFA FTTASGVREV 240 YSFSFENAVL LSAEKYVGDR LIYRMESTAY TNDLADTGAD RLFE 284
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32CV0-F1-model_v4 | 72 | 284 | 11 | 203 | 0.4833 |
0.7371 |
| AF-P44792-F1-model_v4 | 73 | 284 | 12 | 204 | 0.4818 |
0.7325 |
| AF-Q58100-F1-model_v4 | 71 | 284 | 10 | 195 | 0.468 |
0.7534 |
| AF-H9L461-F1-model_v4 | 38 | 284 | 15 | 203 | 0.4626 |
0.7191 |
| AF-P0AFX9-F1-model_v4 | 82 | 284 | 19 | 203 | 0.4534 |
0.716 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2p4b-assembly2.cif.gz_C-2 | 86 | 284 | 1 | 180 | 0.4909 |
0.7312 |
| 2v43-assembly1.cif.gz_A | 87 | 284 | 1 | 179 | 0.4879 |
0.7315 |
| 3m4w-assembly2.cif.gz_D | 87 | 284 | 1 | 180 | 0.4806 |
0.7248 |
| 3m4w-assembly1.cif.gz_C | 88 | 284 | 1 | 180 | 0.4744 |
0.7232 |
| 2v43-assembly2.cif.gz_C-2 | 87 | 284 | 1 | 176 | 0.4726 |
0.7357 |
| 3m4w-assembly2.cif.gz_B | 86 | 284 | 1 | 179 | 0.4686 |
0.7261 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AFY0-F1-model_v4 | 71 | 284 | 10 | 203 | 0.4839 |
0.7337 |
| AF-P44792-F1-model_v4 | 73 | 284 | 12 | 204 | 0.4818 |
0.7325 |
| AF-Q58100-F1-model_v4 | 71 | 284 | 10 | 195 | 0.468 |
0.7534 |
| AF-D0ZSY7-F1-model_v4 | 36 | 284 | 13 | 203 | 0.4614 |
0.7097 |
| AF-P0AFX9-F1-model_v4 | 82 | 284 | 19 | 203 | 0.4534 |
0.716 |
| AF-P0AFY1-F1-model_v4 | 85 | 284 | 24 | 204 | 0.4508 |
0.7287 |