PROTEIN: HRGMv2_2906_14_41
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Protein File & Metadata
Source:
HRGMv2_2906_14_41.pdb
Genome ID:
Protein ID:
HRGMv2_2906_14_41
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Protein Sequence
MGTHARKIQF NLLSVVLCQV VTIAIGFLLP RLYIENFGSS VNGVLSTIKQ IFTYLCLLEA 60 GVGLATSQAL LRPVATGDRA AINSILAATR RHYIRIGVTY AAAISLIAVI YGFCIDTGLP 120 SRTVIALVLL NGIPSLVTFF VQGKYSILLE TDGMQYVITN SQTVLQVVSG FLKVAVLMLT 180 DNLVLMQAAY CMTAVAQLLY VAFYAKKHYS WLDLNVTADF RAISQKNAVL LHQLSAMVFN 240 NTDILLLSFL TDFNTVSVYY VYNLFFIQVE TFIGCLAKGF NFALGQLFSV DRDLFLRRFR 300 VYECLYIMLN FVVYTAMGVF LLPLIQIYTG GIRDADYIRP TLLLLFAVAK MLSAAKLPAN 360 QVIEYAGAFR ATRWHAVCEM AINLSLTVVG ILRFGICGAL LGTVAAIVFR AAVTLFYTNR 420 KILGRSVWKS LGLLAANGAV FGGIYAIFGT THFCGMRFLT LCLHGILNML WILPVYCIVN 480 AIVCPEAFRT VTDRIGLLLG RMKGAKR 507
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 2 | 502 | 1 | 476 | 0.8487 |
0.8916 |
| AF-A0A0H3GSJ3-F1-model_v4 | 2 | 503 | 1 | 478 | 0.8397 |
0.8812 |
| AF-Q8DPI1-F1-model_v4 | 1 | 507 | 1 | 495 | 0.8359 |
0.8632 |
| AF-Q58467-F1-model_v4 | 1 | 502 | 1 | 507 | 0.8307 |
0.8587 |
| AF-H9L497-F1-model_v4 | 2 | 503 | 1 | 486 | 0.8305 |
0.8716 |
| AF-P77377-F1-model_v4 | 2 | 503 | 1 | 486 | 0.8236 |
0.8652 |
| AF-P37746-F1-model_v4 | 1 | 426 | 1 | 415 | 0.8064 |
0.899 |
| AF-Q2G0R7-F1-model_v4 | 1 | 500 | 1 | 503 | 0.8011 |
0.8323 |
| AF-Q32ET1-F1-model_v4 | 2 | 497 | 1 | 511 | 0.7956 |
0.8369 |
| AF-P0AF16-F1-model_v4 | 2 | 497 | 1 | 511 | 0.7936 |
0.8351 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 504 | 1 | 512 | 0.8172 |
0.8487 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 502 | 36 | 545 | 0.7736 |
0.828 |
| QNU38870.1 | GT4 | 1 | 507 | 1 | 481 | 0.7391 |
0.8576 |
| QJC17489.1 | GT2 | 1 | 506 | 338 | 848 | 0.702 |
0.8856 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 507 | 1 | 616 | 0.6701 |
0.864 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 507 | 9 | 660 | 0.6684 |
0.8805 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 5 | 507 | 1 | 642 | 0.6581 |
0.8316 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 507 | 2 | 549 | 0.6563 |
0.8284 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 507 | 4 | 673 | 0.6528 |
0.833 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 500 | 19 | 518 | 0.6477 |
0.8287 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 504 | 1 | 512 | 0.8172 |
0.8487 |
| A0A160T2N7 | GT28 | 1 | 502 | 36 | 545 | 0.7736 |
0.828 |
| QNU38870.1 | GT4 | 1 | 507 | 1 | 481 | 0.7391 |
0.8576 |
| QJC17489.1 | GT2 | 1 | 506 | 338 | 848 | 0.702 |
0.8856 |
| A0A3Q9G719 | GT4 | 1 | 507 | 1 | 616 | 0.6701 |
0.864 |
| D1BIF1 | GT4 | 1 | 507 | 9 | 660 | 0.6684 |
0.8805 |
| A0A2U8PPB3 | GT4 | 5 | 507 | 1 | 642 | 0.6581 |
0.8316 |
| A0A3T0RPT8 | GT4 | 1 | 507 | 2 | 549 | 0.6563 |
0.8284 |
| A0A517Z2I8 | GT2 | 1 | 507 | 4 | 673 | 0.6528 |
0.833 |
| F9ZKY1 | GT2 | 1 | 500 | 19 | 518 | 0.6477 |
0.8287 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 9 | 495 | 1 | 496 | 0.7922 |
0.8349 |
| 6nc6-assembly2.cif.gz_B | 8 | 493 | 1 | 461 | 0.783 |
0.84 |
| 7wag-assembly1.cif.gz_A | 5 | 498 | 2 | 513 | 0.7763 |
0.8278 |
| 6cc4-assembly1.cif.gz_A | 1 | 499 | 57 | 608 | 0.7374 |
0.8308 |
| 5y50-assembly1.cif.gz_A | 6 | 423 | 8 | 436 | 0.68 |
0.7894 |
| 3wbn-assembly1.cif.gz_A | 1 | 424 | 1 | 446 | 0.6793 |
0.7814 |
| 3vvs-assembly1.cif.gz_A | 1 | 424 | 1 | 440 | 0.6689 |
0.7654 |
| 6hfb-assembly4.cif.gz_D | 1 | 424 | 2 | 447 | 0.6688 |
0.7708 |
| 3vvn-assembly1.cif.gz_A | 1 | 424 | 1 | 441 | 0.6682 |
0.7655 |
| 5xjj-assembly1.cif.gz_A | 7 | 424 | 10 | 438 | 0.6643 |
0.7723 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 5 | 507 | 1 | 505 | 0.875 |
0.8953 |
| AF-Q48457-F1-model_v4 | 2 | 505 | 1 | 485 | 0.8396 |
0.8767 |
| AF-P33699-F1-model_v4 | 1 | 507 | 3 | 491 | 0.8348 |
0.8727 |
| AF-Q58467-F1-model_v4 | 1 | 502 | 1 | 507 | 0.8307 |
0.8587 |
| AF-P77377-F1-model_v4 | 2 | 503 | 1 | 486 | 0.8236 |
0.8652 |
| AF-O32273-F1-model_v4 | 1 | 506 | 2 | 483 | 0.8136 |
0.8537 |
| AF-O67658-F1-model_v4 | 1 | 507 | 1 | 499 | 0.8077 |
0.836 |
| AF-D4GU68-F1-model_v4 | 2 | 502 | 1 | 472 | 0.8071 |
0.8556 |
| AF-P37746-F1-model_v4 | 1 | 426 | 1 | 415 | 0.8064 |
0.899 |
| AF-O34674-F1-model_v4 | 1 | 500 | 1 | 538 | 0.8021 |
0.8583 |