dbCAN Logo

PROTEIN: HRGMv2_2906_13_33

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_2906_13_33.pdb
Genome ID:
HRGMv2_2906
Protein ID:
HRGMv2_2906_13_33

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKLRILAAAL   AASLLVPLLA   ACGKKPDVTT   DPAASDTTAP   EAGYTLPTYD   FEGHEFNILS 60
VGRKNVVEND   FLFDDKNPSV   LDAAVERRNR   AVEGLYNIKI   VTAQKDSTAN   QQSPEAYRTL 120
VREATAGDYT   YDACVIPGYD   VSQLAYEGYL   TDLGILPYFD   AENTWYDQSA   NETFRFAGSL 180
FFTTGDFGIN   MMDQAYCVAF   NKDLAAQYHV   ENLYDLVDDN   LWTLEKMYSI   AKDVSDDTDG 240
DSVTDVYGLL   YWVDAVYGVV   NAAGQRMVTL   NDATNTYELT   LNTETTYNVL   ELFYNMTHDA 300
RTSLMYQHNS   AAKEYVATFS   GNKALFFMTT   IGTLSDFRDM   ETDYGILPYA   HYSERQTAYE 360
STVAPYYMNF   LCVPLLVEDE   ARTSAILEAI   GYYSHEYILP   AYYEKTLMGQ   YTRDEESADM 420
LDIIFGGRAY   DLGYCYQPAN   LNKNLIYLLQ   SGSFDWSSRY   ASLEQPATII   LGVISEAYRR 480
SLGITAEQ 488
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F8J3-F1-model_v4 53 474 29 435 0.6987 0.8034
AF-P71619-F1-model_v4 52 484 35 436 0.6922 0.8041
AF-Q7AQ51-F1-model_v4 54 474 34 445 0.6895 0.7917
AF-K0F2E6-F1-model_v4 52 484 42 442 0.6838 0.8007
AF-O53485-F1-model_v4 1 474 2 439 0.6792 0.7348
AF-Q8DNN7-F1-model_v4 53 476 34 437 0.6787 0.7862
AF-K0F1Y0-F1-model_v4 51 473 50 433 0.6765 0.8156
AF-A0A0H3GKJ8-F1-model_v4 49 477 23 410 0.6722 0.7842
AF-K0EMP7-F1-model_v4 49 476 34 444 0.6686 0.7688
AF-A0A0H3GHK7-F1-model_v4 52 488 21 436 0.6668 0.7532
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 52 477 33 417 0.6198 0.7377
AF-A0A7U1BNH7-F1-model_v4 GH10 52 488 28 745 0.5084 0.6843
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 52 477 33 417 0.6198 0.7377
A0A9Q8PNJ5 GH4 19 474 437 866 0.5126 0.7396
A0A7U1BNH7 GH10 52 488 28 745 0.5084 0.6843
UJP10085.1 GH154 47 453 703 1167 0.3632 0.6357
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4rk2-assembly1.cif.gz_A 52 470 1 393 0.7225 0.8135
3uor-assembly2.cif.gz_B 54 486 1 395 0.7197 0.8093
6dtr-assembly1.cif.gz_A 52 473 1 393 0.7168 0.8077
4mfi-assembly1.cif.gz_A 53 479 6 403 0.7129 0.8049
4hs7-assembly2.cif.gz_B 49 473 1 376 0.7094 0.8157
7nbz-assembly2.cif.gz_B 51 471 1 385 0.7034 0.8003
7nbz-assembly1.cif.gz_A 52 471 1 377 0.6952 0.7978
7c6x-assembly7.cif.gz_G 55 474 1 416 0.6941 0.7645
6x84-assembly2.cif.gz_B 52 477 1 414 0.6935 0.7671
7c6z-assembly1.cif.gz_A 54 472 1 415 0.6922 0.7637
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P94528-F1-model_v4 51 470 31 433 0.6855 0.7921
AF-Q53684-F1-model_v4 51 485 26 432 0.6849 0.7989
AF-Q9K491-F1-model_v4 47 477 32 425 0.6781 0.7934
AF-O31518-F1-model_v4 48 471 27 427 0.6729 0.7771
AF-Q00749-F1-model_v4 51 472 33 420 0.657 0.7752
AF-O06989-F1-model_v4 52 477 34 417 0.6549 0.7789
AF-Q8FVS7-F1-model_v4 52 473 23 411 0.6441 0.7536
AF-P9WGU9-F1-model_v4 52 471 30 464 0.6433 0.7421
AF-P9WGU8-F1-model_v4 52 471 31 464 0.6422 0.7407
AF-Q7LYW7-F1-model_v4 48 476 38 450 0.6376 0.737
Download Full SwissProt Results