dbCAN Logo

PROTEIN: HRGMv2_2871_7_56

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_2871_7_56.pdb
Genome ID:
HRGMv2_2871
Protein ID:
HRGMv2_2871_7_56

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKEVKRWLSL   FLAFAMLMTV   LSVNTMSAIA   AVSWTDLWSG   DGWTLGEENG   EPIYSAPNEL 60
YRLSYTGSLD   GMNTVEGDIR   IDSIGVDFGN   ISLGLGTADG   AKRFFSYTHG   TKTMRVFDQN 120
DALQASVEME   NALPVGEYTH   WKMQWDGVKM   TLFINDEKVM   DYNYAAAGLH   FEAGATCWIS 180
EWFHAATVKN   LSVKHVELPV   SWTDLWSGDG   WTLGEEXXXX   XXXXXXXXXX   XXXXXXXXXX 240
XXXXXXXXXX   THLQRSQ 257
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A3AX59-F1-model_v4 1 206 2 251 0.6325 0.7936
AF-A0A0K0ECK4-F1-model_v4 29 196 20 161 0.611 0.8164
AF-A0A0R0I8A1-F1-model_v4 1 203 1 230 0.6078 0.7438
AF-Q58355-F1-model_v4 31 197 45 224 0.6002 0.8094
AF-K7TQ85-F1-model_v4 2 201 13 251 0.5924 0.7564
AF-P24806-F1-model_v4 1 202 1 232 0.592 0.7315
AF-A0A0R0F2H9-F1-model_v4 1 202 3 242 0.5886 0.7379
AF-A0A0R0J6V4-F1-model_v4 32 201 7 211 0.5876 0.7883
AF-Q76BW5-F1-model_v4 1 203 4 254 0.5875 0.744
AF-C6TMD1-F1-model_v4 1 203 3 239 0.5859 0.7274
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9E7Z4P9 CBM0 31 207 20 213 0.6483 0.8117
AF-A0A7Z0Q8V1-F1-model_v4 CBM0 31 197 4 198 0.6481 0.8269
A0A9J7BT67 CBM66 19 196 21 217 0.6445 0.8079
AF-A0A2R4FLE4-F1-model_v4 CBM66 31 208 21 195 0.6439 0.7824
B7KRI4 CBM66 31 197 24 214 0.6231 0.8236
A0A1H4SDX4 CBM0 31 197 26 220 0.6195 0.829
AF-I3SQM4-F1-model_v4 GH16_20 31 196 25 202 0.6114 0.7933
AF-A0A0H4P9X6-F1-model_v4 CBM0 31 198 39 246 0.5933 0.8291
AF-A0A1R3K0C6-F1-model_v4 GH16_27 32 196 11 204 0.5924 0.791
AF-A0A5C7I1H1-F1-model_v4 GH16_27 32 196 10 203 0.5915 0.7882
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9J7BT67 CBM66 19 196 21 217 0.6445 0.8079
A0A2R4FLE4 CBM66 31 208 21 195 0.6439 0.7824
B7KRI4 CBM66 31 197 24 214 0.6231 0.8236
A0A6C0GS63 CBM66 31 208 34 228 0.6183 0.7971
QQR36511.1 GH16_3 31 198 9 241 0.5738 0.7938
B7E8P0 GH16_20 1 202 1 271 0.5735 0.7483
WGP08706.1 CBM66 31 210 2 226 0.5697 0.7225
A0A2K1IRA9 GH16_27 32 196 42 235 0.5672 0.7927
N0DX90 GH16_20 25 204 11 251 0.5669 0.7939
UWR01196.1 GH16_21 7 198 13 261 0.5651 0.733
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4b1m-assembly3.cif.gz_C 33 195 3 161 0.6718 0.8119
3d6e-assembly1.cif.gz_A 31 196 7 185 0.6206 0.7748
3d6e-assembly2.cif.gz_B 32 196 6 186 0.6201 0.7793
1oq1-assembly2.cif.gz_B 31 199 10 220 0.6197 0.8207
5sv8-assembly1.cif.gz_A 32 196 2 194 0.6182 0.7991
5dze-assembly1.cif.gz_A 32 196 3 195 0.6159 0.7982
1viw-assembly1.cif.gz_B 31 196 7 196 0.6139 0.7871
2gnb-assembly1.cif.gz_B 31 204 6 229 0.5873 0.7691
1mac-assembly2.cif.gz_B 31 197 5 212 0.5843 0.7705
2e6v-assembly4.cif.gz_D 31 205 5 220 0.5842 0.7747
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P18271-F1-model_v4 32 196 1 175 0.6484 0.7895
AF-O31524-F1-model_v4 31 199 10 220 0.6212 0.8228
AF-Q58355-F1-model_v4 31 197 45 224 0.6002 0.8094
AF-P24806-F1-model_v4 1 202 1 232 0.592 0.7315
AF-Q76BW5-F1-model_v4 1 203 4 254 0.5875 0.744
AF-Q9SMP1-F1-model_v4 24 202 17 240 0.5704 0.7901
AF-Q42460-F1-model_v4 31 198 27 249 0.5629 0.8044
AF-Q9M0D1-F1-model_v4 31 203 21 243 0.5627 0.8037
AF-P35694-F1-model_v4 30 203 28 247 0.5612 0.8033
AF-Q9FI31-F1-model_v4 31 203 26 247 0.5604 0.806
Download Full SwissProt Results