PROTEIN: HRGMv2_2871_19_9
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Protein File & Metadata
Source:
HRGMv2_2871_19_9.pdb
Genome ID:
Protein ID:
HRGMv2_2871_19_9
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Protein Sequence
MSLTARPLLP VTGRSVELEL TPDPPFRLEE GKEYTIRCTP LSGFRRYSAG REVDTSDFAG 60 FDRARPAVAS NGRLRLDMCF PQEDEYWLRV SDGEREIGCP RVYALEPDLH ACYPLKGDLH 120 NHTYLSDGRE SPAYVIAMLR KKGADFASIT DHGWYQPSLE ALEYWKELGT DFLVLPGEEV 180 HAPDCRVHIL SVGGRFSVNS WGYDGASDYR EKLEQEKSKL PANLDEDDRT RIAASQAVFD 240 KAREAGALSL FCHPFWETAD GFDIHEDVTR YLLDHRRFDA LEVIGGYWPH EYRDNLFQTA 300 YYYQYCMGAG SLLPLMGCSD CHSTDSGLFT GLFYSIVFAE DNTFEAIAGA VRAGRSVAVK 360 ALPGQMPEAF GDFRYVRLCA FLFGRVFPGH DRICEEEGEW MRQAVFGRQE SFDQLKEPSR 420 RILDYYDNLK 430
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0D2GG65-F1-model_v4 | 110 | 388 | 174 | 450 | 0.4512 |
0.7283 |
| AF-Q54IG4-F1-model_v4 | 82 | 399 | 131 | 361 | 0.4249 |
0.816 |
| AF-Q54B73-F1-model_v4 | 45 | 399 | 130 | 359 | 0.4193 |
0.8186 |
| AF-A0A132Z008-F1-model_v4 | 107 | 430 | 1 | 415 | 0.3903 |
0.5972 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B3DWM3-F1-model_v4 | GT28 | 107 | 430 | 392 | 645 | 0.3844 |
0.7559 |
| WCB91666.1 | GT4 | 48 | 414 | 20 | 663 | 0.3798 |
0.5377 |
| A0A0B7GRQ1 | GH0 | 54 | 385 | 1 | 290 | 0.3579 |
0.684 |
| AF-A0A0B7GRQ1-F1-model_v4 | GH0 | 54 | 385 | 1 | 290 | 0.3579 |
0.684 |
| QYM64029.1 | GH38 | 102 | 386 | 68 | 326 | 0.3416 |
0.7516 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WCB91666.1 | GT4 | 48 | 414 | 20 | 663 | 0.3798 |
0.5377 |
| UZP66471.1 | GT4 | 41 | 408 | 16 | 325 | 0.3479 |
0.6244 |
| A0A7M2WZ79 | GT4 | 24 | 405 | 11 | 316 | 0.3429 |
0.6287 |
| A0A9E9HFY6 | GT4 | 10 | 403 | 1 | 313 | 0.3428 |
0.6196 |
| QYM64029.1 | GH38 | 102 | 386 | 68 | 326 | 0.3416 |
0.7516 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3e38-assembly1.cif.gz_B | 102 | 388 | 10 | 280 | 0.5343 |
0.7502 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.