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PROTEIN: HRGMv2_2825_44_80

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Protein File & Metadata
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Source:
HRGMv2_2825_44_80.pdb
Genome ID:
HRGMv2_2825
Protein ID:
HRGMv2_2825_44_80

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Detailed structural information will appear here after analysis...

Protein Sequence 
MFSFKPADFV   PYKNQEVLER   CRNITREEMT   VHPNPDFKIH   VVDNPGAIWI   GDMVARIQAS 60
DMLDKKCVMI   LPNPCPVIYC   TVAEIINLNN   ISCRNVYVFT   MDEWADNDGN   IAPSTYQRGF 120
TYSQLKYFYG   SIREDLRMPL   DHIHYPTTEN   IADYSKMITE   CGEGGADICY   SGPGWAGHIA 180
FIDPLTPEFG   TPSVEDFMNM   DARVVTLNPM   TIMQNSLHGV   FGCSGDIANV   PPRAATIGPA 240
DVRRARARME   SHDLTTMGTF   SSWQRMISRL   ILHGEVTPLV   PASILQLLKT   DVYVSEEIAK 300
PIECMEKVGY 310
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q2G0K8-F1-model_v4 37 302 1 242 0.7741 0.8987
AF-Q04802-F1-model_v4 37 302 1 245 0.7659 0.8743
AF-A0A132YZ81-F1-model_v4 37 302 1 233 0.7642 0.8849
AF-P42912-F1-model_v4 25 298 9 251 0.7629 0.8829
AF-Q9XVJ2-F1-model_v4 37 302 1 246 0.7608 0.8968
AF-A0A0K0DTD1-F1-model_v4 37 302 1 247 0.7538 0.8855
AF-A0A3Q0KJ37-F1-model_v4 37 302 1 247 0.7534 0.8663
AF-Q32IQ2-F1-model_v4 37 302 1 247 0.7532 0.8833
AF-Q8ZQX7-F1-model_v4 37 302 1 247 0.7532 0.8833
AF-A0A0H3GK04-F1-model_v4 37 302 1 247 0.7531 0.8832
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 37 289 1 280 0.5656 0.6999
AF-A0A0H4PAS9-F1-model_v4 CE9 37 304 1 246 0.5167 0.8663
AF-G0IWQ0-F1-model_v4 CE9 37 303 1 245 0.5162 0.8681
AF-A0A1W2H3T6-F1-model_v4 CE9 37 302 1 243 0.5112 0.8658
AF-J9UUU6-F1-model_v4 CE9 37 302 1 239 0.509 0.8911
AF-D8I9Y7-F1-model_v4 CE9 37 302 1 239 0.5065 0.8867
AF-A0A3B6VCF9-F1-model_v4 CE9 37 302 1 239 0.506 0.8857
AF-K0JLB5-F1-model_v4 CE9 37 302 1 239 0.506 0.8857
AF-A0A3B6VIU1-F1-model_v4 CE9 37 302 1 239 0.5058 0.8852
AF-G0ELA3-F1-model_v4 CE9 37 302 1 239 0.5058 0.8852
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 37 289 1 280 0.5656 0.6999
A0A0H4PAS9 CE9 37 304 1 246 0.5167 0.8663
A0A3B6VIU1 CE9 37 302 1 239 0.5058 0.8852
U5ECU6 CE9 34 302 389 631 0.4958 0.8495
A0A871RFD9 GH3 15 302 969 1250 0.454 0.7981
A0A875S4F4 GH3 26 303 832 1287 0.4461 0.8034
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2bkv-assembly1.cif.gz_A 37 302 1 241 0.7867 0.897
5hj5-assembly2.cif.gz_B 37 303 1 248 0.754 0.882
7lqn-assembly2.cif.gz_I 36 302 1 248 0.7433 0.8625
1ne7-assembly1.cif.gz_E 37 302 1 247 0.743 0.8844
6nbg-assembly1.cif.gz_E 35 302 1 239 0.7389 0.8524
7lqm-assembly2.cif.gz_D 37 302 1 247 0.7387 0.8693
7lqm-assembly1.cif.gz_A 37 302 1 243 0.7371 0.8664
7lqm-assembly1.cif.gz_B 37 302 1 245 0.735 0.8685
3hn6-assembly1.cif.gz_D 34 302 1 250 0.7349 0.8601
1cd5-assembly1.cif.gz_A 37 302 1 247 0.7311 0.8598
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4L9T8-F1-model_v4 37 302 1 242 0.7937 0.9026
AF-Q8CTR3-F1-model_v4 37 302 1 242 0.7934 0.9038
AF-Q49VB6-F1-model_v4 37 302 1 242 0.7926 0.9012
AF-Q97MK9-F1-model_v4 37 302 1 241 0.7902 0.9003
AF-Q5HRH8-F1-model_v4 37 302 1 242 0.7898 0.9001
AF-A0PYW1-F1-model_v4 37 302 1 241 0.7862 0.8962
AF-C3L2N7-F1-model_v4 37 302 1 241 0.785 0.9002
AF-C1FV12-F1-model_v4 37 302 1 241 0.7849 0.9
AF-B1KZ07-F1-model_v4 37 302 1 241 0.784 0.8991
AF-A7FX73-F1-model_v4 37 302 1 241 0.7839 0.8991
Download Full SwissProt Results