PROTEIN: HRGMv2_2823_6_38
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Protein File & Metadata
Source:
HRGMv2_2823_6_38.pdb
Genome ID:
Protein ID:
HRGMv2_2823_6_38
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Protein Sequence
MKVKNIIKAL TVSVIGVSLF TACGNSGSST KTVSGSKGEK LQVIRVANMT GQPDQYADYI 60 GTEQGIFEKY GIALETSEYA AGINTVDAIA TGTADTGLLA DFALVNRFGN TLDNTNLVIY 120 SDLSSSVSYN GGLYVAPKYK DNLDALDGSE GWITTVGTVY DYFNWQAQTY LKLDPAKQKS 180 VNTDSITTQI AVAHNGEASA AVVTGSAIKK YEEEGWVQVA SAKDIGIAVS SYLITTNDFA 240 KNNSELLANY LKALDESSKY ITENLDESAS KISEKFGIEP DDFKTNWEQY DVKLGLSESA 300 AEHLDSLNSW AYDNGKYLTE YDIRKFYSAD AAKKAFPDNT DVKLSENKEE F 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I0N8-F1-model_v4 | 16 | 337 | 20 | 314 | 0.7175 |
0.8224 |
| AF-Q9HYG1-F1-model_v4 | 19 | 341 | 18 | 323 | 0.7126 |
0.8025 |
| AF-Q9I0P2-F1-model_v4 | 33 | 339 | 19 | 312 | 0.7093 |
0.8218 |
| AF-A0A175VVJ3-F1-model_v4 | 19 | 338 | 9 | 314 | 0.7024 |
0.7829 |
| AF-Q59X88-F1-model_v4 | 33 | 334 | 1 | 299 | 0.7004 |
0.7797 |
| AF-A0A175VX93-F1-model_v4 | 27 | 341 | 1 | 314 | 0.696 |
0.7574 |
| AF-A0A0H3GZA9-F1-model_v4 | 18 | 339 | 21 | 316 | 0.6952 |
0.8042 |
| AF-U7PRE8-F1-model_v4 | 18 | 338 | 11 | 329 | 0.6938 |
0.7601 |
| AF-Q9I0P1-F1-model_v4 | 18 | 340 | 20 | 317 | 0.6937 |
0.8056 |
| AF-K0ERV9-F1-model_v4 | 44 | 336 | 1 | 297 | 0.6928 |
0.7839 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q5AU13 | GH18 , GH31 | 1 | 340 | 585 | 1446 | 0.4168 |
0.7413 |
| AF-C8X575-F1-model_v4 | GH23 | 38 | 285 | 33 | 453 | 0.4007 |
0.6326 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2x26-assembly2.cif.gz_B | 29 | 329 | 1 | 286 | 0.7336 |
0.8357 |
| 2x26-assembly1.cif.gz_A | 29 | 334 | 1 | 290 | 0.7198 |
0.832 |
| 3ksx-assembly1.cif.gz_A | 27 | 330 | 1 | 289 | 0.6997 |
0.7883 |
| 3un6-assembly1.cif.gz_A | 33 | 337 | 1 | 290 | 0.6863 |
0.7757 |
| 7ahr-assembly1.cif.gz_A | 19 | 337 | 1 | 283 | 0.671 |
0.7673 |
| 4esx-assembly1.cif.gz_B | 17 | 339 | 1 | 309 | 0.6694 |
0.7368 |
| 6st1-assembly2.cif.gz_B | 31 | 335 | 1 | 297 | 0.6665 |
0.7451 |
| 4h6d-assembly4.cif.gz_E | 31 | 341 | 1 | 297 | 0.6656 |
0.7503 |
| 2x7q-assembly1.cif.gz_A | 30 | 335 | 1 | 301 | 0.6655 |
0.7467 |
| 4h67-assembly2.cif.gz_E | 30 | 340 | 1 | 300 | 0.6654 |
0.7471 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P40400-F1-model_v4 | 24 | 338 | 24 | 325 | 0.6875 |
0.7936 |
| AF-P75853-F1-model_v4 | 29 | 338 | 25 | 319 | 0.6857 |
0.7932 |
| AF-C0SP84-F1-model_v4 | 35 | 339 | 24 | 334 | 0.6696 |
0.7714 |
| AF-Q576E1-F1-model_v4 | 33 | 338 | 19 | 319 | 0.668 |
0.7639 |
| AF-Q8FUN4-F1-model_v4 | 34 | 338 | 18 | 319 | 0.668 |
0.7617 |
| AF-Q9KXN1-F1-model_v4 | 32 | 330 | 1 | 282 | 0.665 |
0.7622 |
| AF-Q8YDR6-F1-model_v4 | 34 | 337 | 18 | 319 | 0.6646 |
0.7581 |
| AF-Q9L0T8-F1-model_v4 | 20 | 334 | 1 | 282 | 0.6635 |
0.7585 |
| AF-Q5ZV75-F1-model_v4 | 36 | 339 | 1 | 304 | 0.6631 |
0.7472 |
| AF-Q2YJB6-F1-model_v4 | 34 | 335 | 18 | 319 | 0.6622 |
0.7554 |