PROTEIN: HRGMv2_2748_1_2742
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Protein File & Metadata
Source:
HRGMv2_2748_1_2742.pdb
Genome ID:
Protein ID:
HRGMv2_2748_1_2742
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Protein Sequence
MGKKKLLYIN NFEAPYRVPF FNLLGEKFDL TLVLTQRPED RKDRNAKWFA HTERNYKVVY 60 LNTTKIAGVR IAFDIRKMLM DYELIFMDMY GNPTNMYAIF CMNRMKKKFL LSVDGMLPRK 120 HENPLVYMVK KYCLKSPELV MSPGESVDSC LMHYGVPKEK IVRYHFTSLL KDDVLERLPN 180 DEEKRQLRIQ IGLKAE 196
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G290-F1-model_v4 | 4 | 196 | 1 | 346 | 0.5429 |
0.7439 |
| AF-Q94BX4-F1-model_v4 | 1 | 196 | 3 | 335 | 0.5386 |
0.7611 |
| AF-Q4CUY7-F1-model_v4 | 1 | 196 | 1 | 343 | 0.5337 |
0.7581 |
| AF-Q585S5-F1-model_v4 | 1 | 196 | 1 | 343 | 0.5324 |
0.7565 |
| AF-A4I939-F1-model_v4 | 1 | 196 | 1 | 343 | 0.5319 |
0.7553 |
| AF-A0A1D6ICE7-F1-model_v4 | 1 | 196 | 4 | 336 | 0.5317 |
0.7508 |
| AF-I1M0D4-F1-model_v4 | 1 | 196 | 5 | 337 | 0.5308 |
0.7484 |
| AF-Q5A6R7-F1-model_v4 | 1 | 196 | 1 | 334 | 0.5284 |
0.7488 |
| AF-Q9HZ80-F1-model_v4 | 4 | 196 | 1 | 365 | 0.5278 |
0.7392 |
| AF-P32363-F1-model_v4 | 1 | 196 | 1 | 338 | 0.5252 |
0.7449 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UVQ40697.1 | GT4 | 2 | 196 | 3 | 212 | 0.7072 |
0.7696 |
| A0A2T4TDT4 | GT4 | 1 | 196 | 25 | 361 | 0.6655 |
0.8993 |
| AF-A0A172T1I4-F1-model_v4 | GT4 | 4 | 196 | 1 | 328 | 0.6626 |
0.8917 |
| WFB91439.1 | GT4 | 4 | 196 | 1 | 325 | 0.6558 |
0.8846 |
| AF-M1VPA2-F1-model_v4 | GT4 | 1 | 196 | 3 | 335 | 0.6536 |
0.8728 |
| AF-A0A5J6XRW5-F1-model_v4 | GT4 | 4 | 196 | 1 | 326 | 0.6535 |
0.8789 |
| AF-T1SF18-F1-model_v4 | GT4 | 1 | 196 | 3 | 335 | 0.6535 |
0.8722 |
| AF-A0A4U9YD96-F1-model_v4 | GT4 | 1 | 196 | 6 | 333 | 0.6535 |
0.8719 |
| UBF25669.1 | GT4 | 2 | 195 | 1 | 230 | 0.6522 |
0.7386 |
| AF-A0A5P8JT94-F1-model_v4 | GT4 | 1 | 196 | 16 | 343 | 0.6513 |
0.8736 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UVQ40697.1 | GT4 | 2 | 196 | 3 | 212 | 0.7072 |
0.7696 |
| A0A9E8MVL0 | GT4 | 1 | 196 | 1 | 216 | 0.689 |
0.7842 |
| UZQ85769.1 | GT4 | 3 | 165 | 1 | 163 | 0.6666 |
0.7692 |
| A0A2T4TDT4 | GT4 | 1 | 196 | 25 | 361 | 0.6655 |
0.8993 |
| A0A3G9HL18 | GT4 | 1 | 176 | 11 | 195 | 0.6563 |
0.7547 |
| WFB91439.1 | GT4 | 4 | 196 | 1 | 325 | 0.6558 |
0.8846 |
| A0A5J6XRW5 | GT4 | 4 | 196 | 1 | 326 | 0.6535 |
0.8789 |
| T1SF18 | GT4 | 1 | 196 | 3 | 335 | 0.6535 |
0.8722 |
| UBF25669.1 | GT4 | 2 | 195 | 1 | 230 | 0.6522 |
0.7386 |
| A0A5P8JT94 | GT4 | 1 | 196 | 16 | 343 | 0.6513 |
0.8736 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q44571-F1-model_v4 | 1 | 196 | 8 | 249 | 0.5479 |
0.7449 |
| AF-Q94BX4-F1-model_v4 | 1 | 196 | 3 | 335 | 0.5386 |
0.7611 |
| AF-A6ZW78-F1-model_v4 | 1 | 196 | 1 | 338 | 0.5261 |
0.7459 |
| AF-B3LKQ3-F1-model_v4 | 1 | 196 | 1 | 338 | 0.5256 |
0.7452 |
| AF-P32363-F1-model_v4 | 1 | 196 | 1 | 338 | 0.5252 |
0.7449 |
| AF-B5VSZ6-F1-model_v4 | 1 | 196 | 1 | 338 | 0.5249 |
0.7439 |
| AF-Q64323-F1-model_v4 | 1 | 196 | 29 | 361 | 0.5217 |
0.755 |
| AF-P37287-F1-model_v4 | 1 | 196 | 29 | 360 | 0.5214 |
0.7535 |