PROTEIN: HRGMv2_2743_4_12
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Protein File & Metadata
Source:
HRGMv2_2743_4_12.pdb
Genome ID:
Protein ID:
HRGMv2_2743_4_12
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Protein Sequence
MKKLGKYLDE RSLPRLGVLL CFSAVFMLFA SPYTTPLNAY YGYDSAVFMS FGKGITHGLR 60 LYLDLYDNKG PMIFYFNALG YLLGGRTGLW ILQVVFMTFA FELSYRTARL FTGRGTAWLS 120 VLVLLFLYCG TVGEGNMTEE WSLVFSLLPL WLSLRFIKTG APAYRHPKWY SVIYGVCFGV 180 NFMMRATNAA IVCGVLLAFA VLLCREKKFG ALLLHIVLVL CGAALVVGPF ALYFARIGAF 240 DRFMYASFLH NFHYAAGGAA AKTAKDWLMY FARVSMVPVV IYFAVRQMKK GALPLGSALV 300 LIFSCVFGAA VAVLGYSYKH YFLILTPALV PGFAVCAEGV RSMAAGKKAA ERLCAAVLVF 360 CLLPYAPQAA VHAGKSILFN FCGYLDSEKE AMSEIRACID ADPGEVLAYD MRANVYLYLD 420 VDPCFCHAMT QDWMSQDSPF IAKELDEYLR ETPPKWIVSD ASENMRERLE NTYGYTLFRV 480 WDKGGCPALY LHE 493
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CZ87-F1-model_v4 | 9 | 493 | 35 | 518 | 0.7716 |
0.823 |
| AF-Q9HY61-F1-model_v4 | 11 | 493 | 2 | 547 | 0.6993 |
0.7699 |
| AF-A0A0H3GZQ8-F1-model_v4 | 10 | 493 | 1 | 550 | 0.6929 |
0.7625 |
| AF-Q32DT1-F1-model_v4 | 11 | 493 | 2 | 549 | 0.6913 |
0.7621 |
| AF-P76473-F1-model_v4 | 10 | 493 | 1 | 549 | 0.691 |
0.7605 |
| AF-O52327-F1-model_v4 | 10 | 493 | 1 | 546 | 0.6889 |
0.7563 |
| AF-G5EDN2-F1-model_v4 | 9 | 490 | 1 | 493 | 0.6623 |
0.7015 |
| AF-K0F580-F1-model_v4 | 28 | 493 | 1 | 460 | 0.6615 |
0.717 |
| AF-Q9CDA6-F1-model_v4 | 2 | 493 | 2 | 627 | 0.6591 |
0.7575 |
| AF-Q8VDB2-F1-model_v4 | 9 | 493 | 4 | 483 | 0.6571 |
0.6947 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-K4R0C6-F1-model_v4 | GT83 | 6 | 493 | 16 | 476 | 0.7626 |
0.8164 |
| AF-F4GBJ3-F1-model_v4 | GT83 | 3 | 493 | 2 | 503 | 0.7152 |
0.7626 |
| AF-A0A858ZSG0-F1-model_v4 | GT83 | 3 | 493 | 2 | 503 | 0.7143 |
0.762 |
| AF-A0A127JPD6-F1-model_v4 | GT83 | 5 | 493 | 2 | 507 | 0.7134 |
0.7631 |
| AF-A0A7D4HYD7-F1-model_v4 | GT83 | 2 | 493 | 3 | 509 | 0.7129 |
0.7592 |
| AF-A0A1P8JUX7-F1-model_v4 | GT83 | 8 | 493 | 5 | 519 | 0.7115 |
0.7667 |
| AF-A0A1P8FKN2-F1-model_v4 | GT83 | 9 | 493 | 1 | 546 | 0.7113 |
0.7778 |
| AF-Q39X95-F1-model_v4 | GT83 | 5 | 493 | 8 | 554 | 0.7112 |
0.777 |
| WED42327.1 | GT83 | 5 | 493 | 4 | 461 | 0.7104 |
0.7672 |
| AF-E3HFB3-F1-model_v4 | GT83 | 3 | 493 | 4 | 509 | 0.7099 |
0.7574 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K4R0C6 | GT83 | 6 | 493 | 16 | 476 | 0.7626 |
0.8164 |
| A0A6C2YNQ2 | GT83 | 5 | 493 | 19 | 502 | 0.749 |
0.7912 |
| M4V8Z6 | GT83 | 6 | 493 | 1 | 478 | 0.7299 |
0.7654 |
| UCV14583.1 | GT83 | 9 | 493 | 11 | 485 | 0.7202 |
0.7646 |
| UJR80878.1 | GT89 | 11 | 493 | 2 | 468 | 0.7164 |
0.7588 |
| D5EJZ3 | GT83 | 6 | 493 | 16 | 502 | 0.7151 |
0.7579 |
| A0A0W0Z9P3 | GT83 | 4 | 493 | 11 | 477 | 0.7138 |
0.7626 |
| A0A127JPD6 | GT83 | 5 | 493 | 2 | 507 | 0.7134 |
0.7631 |
| A0A2P1PXF2 | GT83 | 11 | 493 | 16 | 486 | 0.7115 |
0.7636 |
| WED42327.1 | GT83 | 5 | 493 | 4 | 461 | 0.7104 |
0.7672 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5f15-assembly1.cif.gz_A | 11 | 493 | 2 | 535 | 0.6986 |
0.7641 |
| 5ezm-assembly1.cif.gz_A | 9 | 493 | 1 | 531 | 0.6932 |
0.7524 |
| 8if8-assembly1.cif.gz_B | 1 | 493 | 4 | 619 | 0.6551 |
0.7467 |
| 7zlh-assembly1.cif.gz_A | 8 | 493 | 6 | 654 | 0.6293 |
0.7407 |
| 7zlg-assembly1.cif.gz_A | 8 | 493 | 6 | 662 | 0.6282 |
0.7425 |
| 7zli-assembly1.cif.gz_A | 8 | 493 | 6 | 661 | 0.6275 |
0.7414 |
| 6s7o-assembly1.cif.gz_A | 9 | 493 | 10 | 647 | 0.6185 |
0.7305 |
| 8age-assembly1.cif.gz_A | 9 | 493 | 9 | 610 | 0.6153 |
0.7212 |
| 7oci-assembly1.cif.gz_F | 9 | 493 | 9 | 605 | 0.6112 |
0.7142 |
| 8agb-assembly1.cif.gz_A | 9 | 493 | 8 | 608 | 0.6106 |
0.7145 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MLH5-F1-model_v4 | 11 | 493 | 2 | 467 | 0.7034 |
0.7495 |
| AF-A0KGY4-F1-model_v4 | 11 | 493 | 1 | 545 | 0.7024 |
0.7713 |
| AF-A4SQX1-F1-model_v4 | 12 | 493 | 3 | 546 | 0.7021 |
0.7722 |
| AF-A9R091-F1-model_v4 | 8 | 493 | 1 | 553 | 0.7017 |
0.771 |
| AF-Q6D2F3-F1-model_v4 | 9 | 493 | 3 | 553 | 0.7008 |
0.7721 |
| AF-A8GDR9-F1-model_v4 | 9 | 493 | 2 | 554 | 0.7004 |
0.7716 |
| AF-Q02R27-F1-model_v4 | 11 | 493 | 2 | 547 | 0.7002 |
0.7707 |
| AF-Q4KC80-F1-model_v4 | 11 | 493 | 2 | 547 | 0.7 |
0.7704 |
| AF-Q9HY61-F1-model_v4 | 11 | 493 | 2 | 547 | 0.6993 |
0.7699 |
| AF-B4EUL1-F1-model_v4 | 14 | 493 | 9 | 548 | 0.699 |
0.7724 |