dbCAN Logo

PROTEIN: HRGMv2_2683_12_13

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_2683_12_13.pdb
Genome ID:
HRGMv2_2683
Protein ID:
HRGMv2_2683_12_13

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKKISRRNFL   LASGVVTIGA   ALAACGGNSS   SSTAASSAAP   ASSAAASASA   EGKVLNIWCW 60
NDEFQSRFND   YYPEVKEIAA   DKSTTTLKDG   TTVKWTINAN   ENNNYQNKLD   EALLNQDSAA 120
DDDKIDIFLI   EADYALKYVD   SDYVLDVKKD   IGLTDSDLAG   QYQYTKDIVS   VDGSQRGTTW 180
QATPGLFAYR   RSIAKDVLGT   DDPAEVQTYL   SDWDKFNDVA   AKAAAKGYKM   LSGFDDAYRT 240
FSNNVSAPWV   SGTTVTVDPN   LMKWVNQTKE   YTDKGYNNKS   SLWDSQWASD   QGPTGKVFGF 300
FYSTWGINFT   LLGNSLETPT   AEGGKEEVGN   GIYGDYAVCE   GPQPYYWGGT   WICGAAGSDN 360
IETIKDVMLK   LTCDEAIMKQ   ITMDTQDYTN   NEKAMEEIAS   SDYKSDFLGG   QNHIALFAEA 420
ATKIDMSNAG   PYDQGLNESF   QNAFKDYFTG   NVEEDAAKAN   FETAIKEKYP   ELTDVVWPA 479
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F002-F1-model_v4 48 472 43 439 0.7101 0.8289
AF-P71619-F1-model_v4 33 474 21 429 0.7064 0.8009
AF-K0F2E6-F1-model_v4 28 474 21 437 0.7053 0.7906
AF-K0EWS5-F1-model_v4 49 479 24 457 0.7052 0.7798
AF-K0F1Y0-F1-model_v4 36 471 33 433 0.7043 0.8095
AF-A0A133CPC5-F1-model_v4 47 473 30 423 0.7026 0.8125
AF-K0EWS9-F1-model_v4 46 473 45 463 0.7006 0.7989
AF-Q8DNN7-F1-model_v4 52 473 34 436 0.6938 0.7985
AF-A0A132Z3C8-F1-model_v4 52 471 32 428 0.6925 0.8013
AF-K0F8J3-F1-model_v4 51 473 29 436 0.6895 0.7849
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A7U1BNH7-F1-model_v4 GH10 50 476 28 735 0.5367 0.7319
A0A9Q8PNJ5 GH4 21 472 179 866 0.531 0.7254
AF-A0A1B0VLS2-F1-model_v4 CBM0 49 474 543 948 0.4879 0.7634
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 50 474 32 416 0.6625 0.7791
K8E205 GH32 51 452 34 344 0.6155 0.7984
A0A7U1BNH7 GH10 50 476 28 735 0.5367 0.7319
A0A9Q8PNJ5 GH4 21 472 179 866 0.531 0.7254
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5ixp-assembly1.cif.gz_A 50 470 1 393 0.8076 0.8985
3uor-assembly2.cif.gz_B 53 474 1 389 0.7506 0.8489
6x84-assembly2.cif.gz_B 50 473 1 411 0.7375 0.8112
7vfq-assembly1.cif.gz_A 52 476 1 394 0.7356 0.8232
2z8d-assembly2.cif.gz_B 47 476 1 399 0.7355 0.8188
7vfq-assembly2.cif.gz_B 52 476 1 396 0.7344 0.8201
6wpn-assembly1.cif.gz_A 54 474 1 395 0.7342 0.8208
7vfr-assembly1.cif.gz_A 52 476 1 397 0.7339 0.8186
8bfy-assembly1.cif.gz_A 53 471 1 393 0.7336 0.8231
2z8d-assembly1.cif.gz_A 48 476 1 401 0.7332 0.8149
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P29822-F1-model_v4 50 470 26 422 0.7528 0.8608
AF-P94528-F1-model_v4 51 471 32 433 0.7428 0.8494
AF-Q9K491-F1-model_v4 37 472 14 424 0.7206 0.8044
AF-Q9KEE7-F1-model_v4 22 473 25 445 0.7174 0.7988
AF-Q8FVS7-F1-model_v4 50 473 23 411 0.7013 0.8108
AF-Q578M8-F1-model_v4 50 473 23 411 0.7007 0.8102
AF-Q2YKZ9-F1-model_v4 50 473 23 411 0.6996 0.809
AF-P76042-F1-model_v4 47 472 24 430 0.6962 0.789
AF-O07009-F1-model_v4 41 474 25 419 0.6915 0.7978
AF-Q53684-F1-model_v4 40 472 19 423 0.6879 0.7999
Download Full SwissProt Results