PROTEIN: HRGMv2_2653_4_154
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Protein File & Metadata
Source:
HRGMv2_2653_4_154.pdb
Genome ID:
Protein ID:
HRGMv2_2653_4_154
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Protein Sequence
MKAGELFDLP TSLERFAEFF TPEMSPWEWV GNIKKALASV DFSSLDSKSD IPDGVTIRGD 60 VYIHPSVKLP AYAEINGPAW IGANVEMRIG CFIRGSVIIG EGCVVGNSCE YKNSLLLDKV 120 QTPHYNYVGD SVLGNRAHLG AGVICANLRL DKGNVMVTLP EGRVNSNMRK LGAMLADDAE 180 AGCNAVLQPG CILMKRSIVL SCMAFKGYLE ENTMVGEKTQ LKKMPRFGF 229
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P75697-F1-model_v4 | 9 | 229 | 1 | 230 | 0.8247 |
0.8751 |
| AF-Q58501-F1-model_v4 | 1 | 228 | 12 | 408 | 0.6927 |
0.9001 |
| AF-Q8DQ18-F1-model_v4 | 42 | 229 | 282 | 451 | 0.5119 |
0.9171 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5z09-assembly1.cif.gz_F-3 | 1 | 217 | 13 | 364 | 0.7008 |
0.9156 |
| 5z09-assembly2.cif.gz_E-2 | 1 | 217 | 13 | 369 | 0.6972 |
0.9155 |
| 5z0a-assembly1.cif.gz_E-2 | 1 | 216 | 12 | 396 | 0.6776 |
0.917 |
| 5z0a-assembly2.cif.gz_C-3 | 1 | 216 | 12 | 396 | 0.6774 |
0.9167 |
| 5z09-assembly2.cif.gz_D-5 | 1 | 217 | 12 | 401 | 0.6767 |
0.9155 |
| 2ggo-assembly1.cif.gz_A | 1 | 217 | 12 | 401 | 0.6759 |
0.9142 |
| 1g95-assembly1.cif.gz_A | 42 | 229 | 275 | 444 | 0.5177 |
0.9181 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0TGD0-F1-model_v4 | 9 | 229 | 1 | 230 | 0.8249 |
0.8747 |
| AF-P75697-F1-model_v4 | 9 | 229 | 1 | 230 | 0.8247 |
0.8751 |
| AF-Q6LYB5-F1-model_v4 | 1 | 228 | 12 | 411 | 0.6951 |
0.9055 |
| AF-A6VG23-F1-model_v4 | 1 | 228 | 12 | 411 | 0.6945 |
0.9048 |
| AF-Q58501-F1-model_v4 | 1 | 228 | 12 | 408 | 0.6927 |
0.9001 |
| AF-A4FX98-F1-model_v4 | 1 | 228 | 12 | 411 | 0.6925 |
0.9021 |
| AF-A6UP85-F1-model_v4 | 1 | 228 | 12 | 414 | 0.6909 |
0.9022 |
| AF-A6UUQ4-F1-model_v4 | 1 | 229 | 12 | 411 | 0.69 |
0.8955 |
| AF-Q975F9-F1-model_v4 | 1 | 217 | 12 | 401 | 0.6779 |
0.9174 |
| AF-Q5GTJ4-F1-model_v4 | 41 | 227 | 39 | 406 | 0.5333 |
0.8356 |