PROTEIN: HRGMv2_2618_5_59
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Protein File & Metadata
Source:
HRGMv2_2618_5_59.pdb
Genome ID:
Protein ID:
HRGMv2_2618_5_59
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Protein Sequence
MSECPEYWKT TLEEIDQQMV GIRKGKRRIL CVSPGGRPVY AVFYGTENQI NRTANLSSAL 60 GAGDPSCFVN RKVGNWRPTL LLAGCIHGGE FEGTAALLNL ISVMETGKDL AEELYATLLS 120 KLNQINLLIL PCVNPDGRSH VPFATMVGKS FEELRYYNQG TWPDGSLCGW PECKKIHPIK 180 GKVGYLGGYF NDDGVNLMHD NFFGKKAAET EALLQMTETY APDFSVLLHG GTNGISHLIA 240 PTYSTPAIAE EVIRFGDAMR RRCQADNLPF AGGVSGGEDR EPPVSFNLIS AMYHLCGAPC 300 ITYESNQGLI DGETDVSMTH SQIYRQHWIL FEALCDHLLE K 341
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-F1M4P0-F1-model_v4 | 15 | 341 | 1 | 279 | 0.6765 |
0.7622 |
| AF-A0A0K0EBW2-F1-model_v4 | 27 | 341 | 1 | 271 | 0.6749 |
0.769 |
| AF-Q9VS65-F1-model_v4 | 1 | 341 | 24 | 341 | 0.672 |
0.7373 |
| AF-A0A044S558-F1-model_v4 | 4 | 341 | 28 | 351 | 0.6649 |
0.7271 |
| AF-A0A077ZC21-F1-model_v4 | 1 | 341 | 37 | 361 | 0.6633 |
0.7402 |
| AF-A0A0K0ELX6-F1-model_v4 | 4 | 341 | 27 | 351 | 0.6582 |
0.7228 |
| AF-A0A3P7DP84-F1-model_v4 | 1 | 341 | 15 | 362 | 0.6527 |
0.7033 |
| AF-A0A0K0DXB9-F1-model_v4 | 4 | 340 | 33 | 333 | 0.6525 |
0.7423 |
| AF-A0A077Z9J8-F1-model_v4 | 1 | 341 | 43 | 384 | 0.6459 |
0.7027 |
| AF-B8JLQ9-F1-model_v4 | 4 | 341 | 30 | 335 | 0.6453 |
0.7507 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-J7IU02-F1-model_v4 | CBM50 | 5 | 337 | 56 | 350 | 0.6235 |
0.738 |
| AF-G7W5Y7-F1-model_v4 | CBM50 | 5 | 337 | 64 | 358 | 0.6161 |
0.735 |
| AF-A0A6C0G8F0-F1-model_v4 | CBM50 | 1 | 341 | 11 | 402 | 0.6032 |
0.6669 |
| AF-A0A3G9J7X1-F1-model_v4 | CBM50 | 1 | 341 | 12 | 403 | 0.6031 |
0.6648 |
| AF-A0A6C0P9U5-F1-model_v4 | CBM50 | 1 | 341 | 22 | 402 | 0.6028 |
0.6638 |
| AF-A0A089KW35-F1-model_v4 | CBM50 | 1 | 341 | 13 | 404 | 0.6011 |
0.6635 |
| A0A0X8D2I1 | CBM50 | 1 | 341 | 14 | 403 | 0.6003 |
0.6631 |
| AF-A0A0X8D2I1-F1-model_v4 | CBM50 | 1 | 341 | 14 | 403 | 0.6003 |
0.6631 |
| AF-A0A6F8TU31-F1-model_v4 | CBM50 | 5 | 341 | 104 | 397 | 0.5995 |
0.7512 |
| AF-A0A383RFA1-F1-model_v4 | CBM50 | 1 | 339 | 14 | 400 | 0.5984 |
0.661 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6C0G8F0 | CBM50 | 1 | 341 | 11 | 402 | 0.6032 |
0.6669 |
| A0A0X8D2I1 | CBM50 | 1 | 341 | 14 | 403 | 0.6003 |
0.6631 |
| A0A383RFA1 | CBM50 | 1 | 339 | 14 | 400 | 0.5984 |
0.661 |
| N0B2S2 | CBM50 | 5 | 341 | 104 | 399 | 0.5972 |
0.7493 |
| QRZ17082.1 | CBM50 | 5 | 338 | 104 | 396 | 0.5922 |
0.7448 |
| A0A0S2S0J3 | CBM50 | 1 | 339 | 13 | 418 | 0.584 |
0.6578 |
| D4L3I2 | CBM50 | 1 | 341 | 14 | 440 | 0.5838 |
0.6682 |
| A0A8J8ML76 | CBM50 | 1 | 338 | 26 | 420 | 0.5838 |
0.6606 |
| A0A078KUT8 | CBM50 | 1 | 338 | 14 | 423 | 0.5838 |
0.6632 |
| A0A975AFY7 | CBM50 | 1 | 337 | 15 | 424 | 0.5833 |
0.6648 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7eqz-assembly1.cif.gz_A | 4 | 341 | 1 | 298 | 0.7086 |
0.7728 |
| 5mrv-assembly2.cif.gz_B | 4 | 341 | 3 | 305 | 0.7001 |
0.7629 |
| 4a94-assembly2.cif.gz_B | 4 | 341 | 1 | 302 | 0.6983 |
0.7582 |
| 1zg8-assembly3.cif.gz_C | 3 | 341 | 1 | 303 | 0.6974 |
0.7567 |
| 4uib-assembly1.cif.gz_A | 4 | 341 | 2 | 303 | 0.6971 |
0.7601 |
| 2c1c-assembly2.cif.gz_B | 5 | 341 | 1 | 309 | 0.6932 |
0.7459 |
| 3osl-assembly2.cif.gz_C | 4 | 341 | 1 | 295 | 0.6929 |
0.7598 |
| 1zli-assembly1.cif.gz_A | 1 | 341 | 1 | 304 | 0.6926 |
0.7513 |
| 2abz-assembly1.cif.gz_A | 4 | 339 | 4 | 299 | 0.6909 |
0.7611 |
| 1zlh-assembly1.cif.gz_A | 5 | 339 | 5 | 301 | 0.6906 |
0.7597 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P04069-F1-model_v4 | 4 | 341 | 1 | 301 | 0.7017 |
0.7644 |
| AF-P42788-F1-model_v4 | 4 | 341 | 1 | 298 | 0.6892 |
0.7595 |
| AF-B8JLQ9-F1-model_v4 | 4 | 341 | 30 | 335 | 0.6453 |
0.7507 |
| AF-Q8IVL8-F1-model_v4 | 4 | 341 | 44 | 347 | 0.64 |
0.7576 |
| AF-Q0II73-F1-model_v4 | 3 | 341 | 45 | 348 | 0.6386 |
0.7575 |
| AF-P83852-F1-model_v4 | 4 | 341 | 5 | 370 | 0.6348 |
0.6875 |
| AF-P30795-F1-model_v4 | 1 | 341 | 75 | 372 | 0.6204 |
0.7554 |
| AF-P54497-F1-model_v4 | 4 | 341 | 77 | 376 | 0.6194 |
0.7449 |
| AF-P21961-F1-model_v4 | 1 | 341 | 99 | 410 | 0.6193 |
0.7471 |
| AF-P15088-F1-model_v4 | 1 | 341 | 104 | 415 | 0.6176 |
0.7483 |