PROTEIN: HRGMv2_2618_17_7
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Protein File & Metadata
Source:
HRGMv2_2618_17_7.pdb
Genome ID:
Protein ID:
HRGMv2_2618_17_7
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Protein Sequence
MNGKGKQLAL NMLSQFTAFA VAMAINFFLI PVIIEKIGKE IYGFYSLSDN FLEYATVITS 60 VINGMANRYI TVAYSKGKTE EANKYFTSVT LVNVFLTAVL AVPAVIMIVF LDKILDVPSS 120 HSLDVKCLWA FVFMMFFVNL IFSRYDASPF AKNRLEITGF INVTSIILKA VLLTLAYTFL 180 YPYIGYIGII VFLCAVYSAI LKVHFKNKLT PDLQFKKELF DFKAVIELAK VGIWNSVSQL 240 SQMLFTGLDL LIANIFMGAE EMSILSIAKT LPIMLISFIG VIAGAFYPSM TISYSTQTTK 300 DFAAETRFAS KMCGFICSVP IIGIVVFGGN FFSLWLPTLT QSEINRVQIL SVLTLLPQAF 360 SIYVFPLYQI NTITCNVRIP AVLDCIIGVV NIAVVYALLR FTDLGLYAIA GVSSALLLLK 420 ITIFVPMYAA SNIGLKRRTF YPYLLRGIFL NAAVFCICGA VHRFMPISSW MMLIAAALIT 480 AVISYGAGFF VVFSSNERKK AFGAIRKRFR GDLY 514
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-H9L497-F1-model_v4 | 2 | 511 | 1 | 485 | 0.8652 |
0.9111 |
| AF-A0A0H3GSJ3-F1-model_v4 | 3 | 510 | 1 | 478 | 0.8633 |
0.9092 |
| AF-Q2G262-F1-model_v4 | 2 | 511 | 1 | 476 | 0.8623 |
0.9093 |
| AF-P77377-F1-model_v4 | 2 | 512 | 1 | 486 | 0.8598 |
0.9043 |
| AF-Q58467-F1-model_v4 | 2 | 513 | 1 | 507 | 0.8535 |
0.8773 |
| AF-Q8DPI1-F1-model_v4 | 2 | 512 | 1 | 492 | 0.8364 |
0.8752 |
| AF-Q32ET1-F1-model_v4 | 4 | 504 | 1 | 510 | 0.831 |
0.8676 |
| AF-P0AF16-F1-model_v4 | 4 | 504 | 1 | 511 | 0.8291 |
0.8659 |
| AF-P37169-F1-model_v4 | 1 | 513 | 9 | 524 | 0.8291 |
0.8568 |
| AF-Q2FXH6-F1-model_v4 | 2 | 509 | 1 | 549 | 0.8236 |
0.8784 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 2 | 514 | 1 | 514 | 0.8553 |
0.8749 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 514 | 36 | 545 | 0.8109 |
0.8572 |
| QNU38870.1 | GT4 | 5 | 512 | 1 | 479 | 0.7692 |
0.9002 |
| QJC17489.1 | GT2 | 1 | 511 | 337 | 846 | 0.7545 |
0.9509 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 2 | 514 | 1 | 590 | 0.6765 |
0.8692 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 514 | 5 | 498 | 0.6697 |
0.8816 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 2 | 514 | 2 | 563 | 0.6694 |
0.8417 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 8 | 514 | 1 | 514 | 0.6681 |
0.8441 |
| AF-D1BIF1-F1-model_v4 | GT4 | 3 | 514 | 7 | 677 | 0.6657 |
0.8757 |
| AF-A0A160KSX1-F1-model_v4 | GT4 | 2 | 514 | 1 | 548 | 0.6624 |
0.8445 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 2 | 514 | 1 | 514 | 0.8553 |
0.8749 |
| A0A160T2N7 | GT28 | 1 | 514 | 36 | 545 | 0.8109 |
0.8572 |
| QNU38870.1 | GT4 | 5 | 512 | 1 | 479 | 0.7692 |
0.9002 |
| QJC17489.1 | GT2 | 1 | 511 | 337 | 846 | 0.7545 |
0.9509 |
| A0A3Q9G719 | GT4 | 2 | 514 | 1 | 590 | 0.6765 |
0.8692 |
| A0A517Z2I8 | GT2 | 1 | 514 | 5 | 498 | 0.6697 |
0.8816 |
| A0A3T0RPT8 | GT4 | 2 | 514 | 2 | 563 | 0.6694 |
0.8417 |
| A0A2U8PPB3 | GT4 | 8 | 514 | 1 | 514 | 0.6681 |
0.8441 |
| D1BIF1 | GT4 | 3 | 514 | 7 | 677 | 0.6657 |
0.8757 |
| A0A0C5BEZ8 | GT4 | 3 | 512 | 1 | 588 | 0.6551 |
0.8437 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 13 | 501 | 1 | 496 | 0.8251 |
0.8686 |
| 6nc6-assembly2.cif.gz_B | 9 | 499 | 1 | 461 | 0.8029 |
0.8639 |
| 7wag-assembly1.cif.gz_A | 1 | 501 | 1 | 509 | 0.798 |
0.8425 |
| 6fhz-assembly1.cif.gz_A | 8 | 437 | 8 | 436 | 0.7703 |
0.8646 |
| 6cc4-assembly1.cif.gz_A | 1 | 508 | 44 | 608 | 0.7701 |
0.8574 |
| 4mlb-assembly1.cif.gz_C | 2 | 435 | 3 | 448 | 0.6831 |
0.775 |
| 6hfb-assembly3.cif.gz_C | 2 | 435 | 3 | 447 | 0.6794 |
0.7708 |
| 6gwh-assembly1.cif.gz_A | 2 | 435 | 2 | 435 | 0.671 |
0.7524 |
| 3wbn-assembly1.cif.gz_A | 2 | 435 | 2 | 446 | 0.6707 |
0.7608 |
| 6ids-assembly1.cif.gz_A | 1 | 434 | 2 | 428 | 0.6656 |
0.7543 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 6 | 512 | 1 | 503 | 0.9469 |
0.9671 |
| AF-P77377-F1-model_v4 | 2 | 512 | 1 | 486 | 0.8598 |
0.9043 |
| AF-Q48457-F1-model_v4 | 2 | 514 | 1 | 485 | 0.8591 |
0.9003 |
| AF-Q58467-F1-model_v4 | 2 | 513 | 1 | 507 | 0.8535 |
0.8773 |
| AF-O32273-F1-model_v4 | 1 | 513 | 1 | 483 | 0.844 |
0.8869 |
| AF-P33699-F1-model_v4 | 2 | 514 | 4 | 489 | 0.8439 |
0.8909 |
| AF-O67658-F1-model_v4 | 5 | 512 | 1 | 498 | 0.8369 |
0.8696 |
| AF-O34238-F1-model_v4 | 1 | 504 | 3 | 525 | 0.8333 |
0.8755 |
| AF-O34674-F1-model_v4 | 2 | 509 | 1 | 539 | 0.8312 |
0.8796 |
| AF-P0AF16-F1-model_v4 | 4 | 504 | 1 | 511 | 0.8291 |
0.8659 |