PROTEIN: HRGMv2_2618_17_5
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Protein File & Metadata
Source:
HRGMv2_2618_17_5.pdb
Genome ID:
Protein ID:
HRGMv2_2618_17_5
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Protein Sequence
MIGIIYAGQI ELSPFVKKYI EIMNRENIPY EIVHWNRSGI KMPDDDKNFT FYQKVERYGR 60 ISGKILPFIS FRRFAKKIIK ERNYEKLIVL TTQTAVLLPE LVCGKYKDRY FFDYRDTSYE 120 YIKLYKSFVD KVIERSRFTA ISSPGFKEYL TDKKELIIAH NFQYDYYNSR VLKCEKSCNG 180 KIIIGYIGYL REYDYLIELT EKFGADSRFE FHVHGSGDCV DRLSDYSKGF KNIKVFGAYD 240 ERDKMNIIDS FDMICYNYPY SFVNYPAVAN KFYDGLIRKK PMFGNLDTYS GKLIDENCLG 300 ISLAENEECI TDKIYDYYKN FDEGEFSENC EAVLKKVIKE DRYYTEKIQE FVK 353
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1K0-F1-model_v4 | 1 | 351 | 2 | 369 | 0.8083 |
0.8527 |
| AF-Q7CQX6-F1-model_v4 | 1 | 353 | 2 | 377 | 0.7877 |
0.8342 |
| AF-A0A0H3GSH7-F1-model_v4 | 1 | 353 | 6 | 380 | 0.7863 |
0.837 |
| AF-Q5F602-F1-model_v4 | 1 | 353 | 1 | 376 | 0.7783 |
0.8258 |
| AF-Q58577-F1-model_v4 | 1 | 353 | 5 | 350 | 0.7778 |
0.812 |
| AF-Q9I3V9-F1-model_v4 | 1 | 351 | 4 | 374 | 0.7741 |
0.8229 |
| AF-Q5FAE0-F1-model_v4 | 1 | 353 | 2 | 387 | 0.7726 |
0.8298 |
| AF-Q5FAD9-F1-model_v4 | 1 | 352 | 1 | 353 | 0.7689 |
0.7973 |
| AF-K0EX89-F1-model_v4 | 1 | 353 | 2 | 364 | 0.7626 |
0.8003 |
| AF-O05083-F1-model_v4 | 1 | 352 | 3 | 353 | 0.7614 |
0.7901 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UQK46245.1 | GT4 | 1 | 353 | 3 | 363 | 0.9215 |
0.9472 |
| AF-A0A2S0M927-F1-model_v4 | GT4 | 1 | 353 | 2 | 361 | 0.9209 |
0.9445 |
| AF-A0A679HC30-F1-model_v4 | GT0 | 1 | 353 | 2 | 361 | 0.9174 |
0.9431 |
| AF-A0A1P8JE08-F1-model_v4 | GT0 | 1 | 353 | 2 | 353 | 0.9161 |
0.9323 |
| AF-A0A7Z2NJM5-F1-model_v4 | GT0 | 1 | 353 | 2 | 349 | 0.9153 |
0.9367 |
| AF-A0A2S1H0C7-F1-model_v4 | GT0 | 1 | 353 | 3 | 347 | 0.9138 |
0.9417 |
| A0A9E8VVQ4 | GT4 | 1 | 353 | 3 | 358 | 0.9109 |
0.9343 |
| AF-A0A131JAN9-F1-model_v4 | GT0 | 1 | 353 | 2 | 358 | 0.9108 |
0.9326 |
| A0A412GB89 | GT0 | 1 | 353 | 2 | 354 | 0.9061 |
0.9229 |
| QIH77981.1 | GT0 | 1 | 353 | 2 | 355 | 0.9026 |
0.9212 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UQK46245.1 | GT4 | 1 | 353 | 3 | 363 | 0.9215 |
0.9472 |
| A0A2S0M927 | GT4 | 1 | 353 | 2 | 361 | 0.9209 |
0.9445 |
| AYE52411.1 | GT4 | 1 | 353 | 2 | 357 | 0.9155 |
0.9339 |
| A0A9E8VVQ4 | GT4 | 1 | 353 | 3 | 358 | 0.9109 |
0.9343 |
| A0A642KMN4 | GT4 | 1 | 353 | 3 | 362 | 0.8724 |
0.9035 |
| A0A975KH74 | GT4 | 1 | 353 | 1 | 364 | 0.8686 |
0.9018 |
| A0A5M6AI14 | GT4 | 1 | 353 | 6 | 368 | 0.8606 |
0.8979 |
| A0A0D8IDG1 | GT4 | 1 | 353 | 3 | 357 | 0.8593 |
0.8847 |
| A0A3A9VVF1 | GT4 | 1 | 353 | 6 | 360 | 0.859 |
0.887 |
| A0A654RU67 | GT4 | 1 | 353 | 3 | 360 | 0.8581 |
0.8859 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6kih-assembly2.cif.gz_B | 1 | 353 | 3 | 397 | 0.7554 |
0.8213 |
| 8b5s-assembly1.cif.gz_A | 1 | 353 | 1 | 363 | 0.7544 |
0.7858 |
| 8b62-assembly2.cif.gz_B | 1 | 353 | 1 | 362 | 0.7509 |
0.7819 |
| 5zes-assembly1.cif.gz_A | 1 | 353 | 4 | 352 | 0.7496 |
0.7847 |
| 8b63-assembly1.cif.gz_A | 1 | 353 | 2 | 365 | 0.7464 |
0.7802 |
| 5ze7-assembly1.cif.gz_A | 1 | 353 | 4 | 348 | 0.7424 |
0.7823 |
| 5zer-assembly1.cif.gz_B | 1 | 353 | 4 | 344 | 0.7388 |
0.7841 |
| 2iw1-assembly1.cif.gz_A | 1 | 353 | 1 | 370 | 0.7386 |
0.7776 |
| 5ze7-assembly1.cif.gz_B | 1 | 353 | 4 | 353 | 0.7384 |
0.7721 |
| 6ejj-assembly1.cif.gz_A | 1 | 353 | 3 | 358 | 0.7365 |
0.7699 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8KIU8-F1-model_v4 | 1 | 353 | 3 | 396 | 0.7783 |
0.8465 |
| AF-Q58577-F1-model_v4 | 1 | 353 | 5 | 350 | 0.7778 |
0.812 |
| AF-P33694-F1-model_v4 | 1 | 353 | 3 | 381 | 0.7748 |
0.8459 |
| AF-P0DMP7-F1-model_v4 | 1 | 351 | 2 | 338 | 0.7708 |
0.8133 |
| AF-P0DMP6-F1-model_v4 | 1 | 351 | 2 | 338 | 0.7685 |
0.8119 |
| AF-O05083-F1-model_v4 | 1 | 352 | 3 | 353 | 0.7614 |
0.7901 |
| AF-Q4JAK2-F1-model_v4 | 1 | 353 | 3 | 352 | 0.755 |
0.7829 |
| AF-Q0P9C7-F1-model_v4 | 1 | 353 | 3 | 365 | 0.7494 |
0.7851 |
| AF-Q0P9C9-F1-model_v4 | 1 | 353 | 1 | 374 | 0.7494 |
0.7972 |
| AF-Q46634-F1-model_v4 | 1 | 351 | 3 | 351 | 0.7476 |
0.7785 |