PROTEIN: HRGMv2_2552_39_6
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Protein File & Metadata
Source:
HRGMv2_2552_39_6.pdb
Genome ID:
Protein ID:
HRGMv2_2552_39_6
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Protein Sequence
MNNPYRYTLR LAVDKNVYTA EKKQRLIDFV KKAHISDVAF FLNQEELSDT HITLDKAKEL 60 IKDVDEISQP LKELGVTISL NPWTTMNHSD RGIAIKPELD IKPMVNYQGV TSLSMACPGY 120 SGWADYISDI YAIWASIHPH ELWLEDDFRH YKNAPFKLGC FCDDHMKQYN DILQTDLSRE 180 EFVHKMFTGG ENIYRNAYLQ VARKEIFHVA HMIEQKVHAV SPTTTLGLMS SWPEVHALEG 240 RDWQKLLDLM SGEDTPAVSR PHLPAYNEVS PQQYARDFEK YTVATRTEVG DKHKIYPEME 300 SFLYSPYAKS NKFTQFQLDT TSLVHADGVL LNMFSMMGDG INPTYRYDAL LDDDKEFLDF 360 LYNHGVDIEQ RGGVIVPMNQ DVAQTKIDEE GTLEGLVASQ TQWLELLSTM GIATKPLNYI 420 DQEIKNKCVA VTGNFLNTLS DEQITQLLTR NFVLLDGDAV VILNNRHLLN LINATSIEVL 480 KNRSGQQSFE QFDGTTISEI SDPRITMLTH TGDYVRIQYQ SQVKVHSHAY DRFENNLGPV 540 TVSDDKFYIL PMTDSPKYGW QAQYTDIREG DIKHFFEEQL SVPHLVNMYN CKMVIDEAQT 600 QMIVSNWSID NVDGINFFLK DRSVKQVSIT YRDENNQMQN EVLDVTLDKK GIYHVDFTVK 660 ELAVVHIQFL D 671
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GP41-F1-model_v4 | 1 | 671 | 10 | 685 | 0.7409 |
0.7658 |
| AF-A0A1D6K353-F1-model_v4 | 1 | 671 | 84 | 527 | 0.5055 |
0.6761 |
| AF-B4FW64-F1-model_v4 | 1 | 638 | 78 | 523 | 0.4983 |
0.6682 |
| AF-O65258-F1-model_v4 | 1 | 644 | 91 | 538 | 0.4972 |
0.6629 |
| AF-Q9I1W4-F1-model_v4 | 1 | 671 | 43 | 662 | 0.4541 |
0.498 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q3N663 | GH0 | 1 | 670 | 3 | 729 | 0.7565 |
0.804 |
| AF-A0A5B9W462-F1-model_v4 | GH151 | 1 | 671 | 23 | 723 | 0.7563 |
0.7988 |
| A0A1R0Z7A5 | GH42 | 1 | 670 | 3 | 726 | 0.7558 |
0.8014 |
| AF-A0A3G9ITD9-F1-model_v4 | GH42 | 1 | 671 | 3 | 715 | 0.75 |
0.7907 |
| AF-A0A4P6M1K7-F1-model_v4 | GH42 | 1 | 671 | 6 | 731 | 0.749 |
0.7953 |
| AF-A0A0M4DC31-F1-model_v4 | GH42 | 1 | 671 | 8 | 665 | 0.7466 |
0.7747 |
| AF-A0A2S0KNZ0-F1-model_v4 | GH42 | 1 | 671 | 10 | 683 | 0.7465 |
0.7704 |
| AF-A0A7Z2VJJ1-F1-model_v4 | GH42 | 1 | 671 | 9 | 688 | 0.7459 |
0.7715 |
| AF-A0A808WA31-F1-model_v4 | GH42 | 5 | 670 | 1 | 660 | 0.7455 |
0.7692 |
| AF-A0A4P8IUV4-F1-model_v4 | GH42 | 5 | 671 | 1 | 663 | 0.7443 |
0.7679 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5B9W462 | GH151 | 1 | 671 | 23 | 723 | 0.7563 |
0.7988 |
| A0A1R0Z7A5 | GH42 | 1 | 670 | 3 | 726 | 0.7558 |
0.8014 |
| A0A8J8MNE5 | GH151 | 1 | 671 | 1 | 679 | 0.7529 |
0.7766 |
| S2KW61 | GH151 | 1 | 671 | 2 | 712 | 0.7493 |
0.7907 |
| A0A6F8Y4E0 | GH42 | 3 | 670 | 1 | 678 | 0.7484 |
0.7718 |
| A0A4Y6V104 | GH42 | 1 | 669 | 5 | 678 | 0.748 |
0.7712 |
| A0A2Z4ALU0 | GH42 | 1 | 671 | 16 | 700 | 0.7479 |
0.7832 |
| A0A8G1TIB7 | GH42 | 1 | 671 | 7 | 732 | 0.7473 |
0.794 |
| BDF45785.1 | GH42 | 1 | 671 | 1 | 692 | 0.7465 |
0.7772 |
| C7QZA9 | GH42 | 1 | 671 | 9 | 682 | 0.7456 |
0.7703 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5e9a-assembly1.cif.gz_A | 1 | 671 | 9 | 679 | 0.7433 |
0.7647 |
| 6t6g-assembly2.cif.gz_EEE | 1 | 670 | 2 | 650 | 0.7421 |
0.7718 |
| 8ibt-assembly1.cif.gz_A | 1 | 671 | 15 | 694 | 0.7416 |
0.7694 |
| 6t75-assembly2.cif.gz_EEE | 1 | 670 | 2 | 642 | 0.7406 |
0.7745 |
| 7omi-assembly2.cif.gz_FFF | 1 | 670 | 2 | 650 | 0.7403 |
0.77 |
| 4ucf-assembly1.cif.gz_C | 1 | 669 | 14 | 684 | 0.7402 |
0.7656 |
| 8ibs-assembly2.cif.gz_F | 1 | 669 | 15 | 691 | 0.7401 |
0.7688 |
| 6t75-assembly1.cif.gz_BBB | 1 | 670 | 2 | 648 | 0.7398 |
0.7704 |
| 4ucf-assembly1.cif.gz_B | 1 | 669 | 13 | 686 | 0.7398 |
0.7662 |
| 3tts-assembly1.cif.gz_A | 1 | 670 | 5 | 675 | 0.7395 |
0.7612 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P22795-F1-model_v4 | 2 | 671 | 1 | 591 | 0.7943 |
0.8582 |
| AF-C8WV58-F1-model_v4 | 1 | 671 | 10 | 686 | 0.7436 |
0.7696 |
| AF-Q0TUR6-F1-model_v4 | 1 | 670 | 10 | 689 | 0.739 |
0.767 |
| AF-C6H178-F1-model_v4 | 1 | 670 | 3 | 667 | 0.7366 |
0.759 |
| AF-Q5FJ41-F1-model_v4 | 1 | 670 | 3 | 667 | 0.7363 |
0.7587 |
| AF-O31529-F1-model_v4 | 2 | 671 | 1 | 662 | 0.7337 |
0.7579 |
| AF-A1A399-F1-model_v4 | 1 | 669 | 16 | 700 | 0.7318 |
0.7656 |
| AF-Q65KX8-F1-model_v4 | 1 | 671 | 1 | 661 | 0.73 |
0.7555 |
| AF-B9LW38-F1-model_v4 | 5 | 671 | 1 | 694 | 0.7266 |
0.7621 |
| AF-P94804-F1-model_v4 | 5 | 671 | 1 | 656 | 0.7251 |
0.754 |